Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2659g00001 ATGAATCTAAGACCAAAACGTCGCCGTCCAAAAGCTTCCCCTGACGTTGAGCATTCAAAACCAGAGTCTCTATTGAGAAAGAAGCAGCCATTCTTGGCATGCAAACAGATAGATGTACAGAGAGAGACAGAGAGAGATATCTCTCATCTGGTGATGGAATTGTGCTCTGGGGGAAGACTTGTCGACCAGATGTTTAGGGAGGGCCCTTGTTCTGAACAGCGGGCTGCTAATATACTTAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAGCCTGAGAATATTCTGCTTACTGCTTCGGGGGAAATAAAGCTTGCTGATTTTGGCCTGGCCATGAGAATTTCTAAGGGTCAGAACTTGACGGGTTTGGCTGGGAACCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGAGTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTTAGACATCCATGGATATCTTTCTACACAGAACATACATTGAAGATCCTGCCCGTTGAATCAAAGTTGAAGCACCAAAATGGAGCTGCTTGCCACAACTTTGTTGCTGCACCTGAACCTAGGTTAGGAAGAAACAGGATGGATGATGGGTTCCTTAATGAGGTTTCAAGCCTTTCTTCATCATCTGAAAGTTGCAATTCAGAATATCATGATGTTTGTGTGTGGATTGATGCACTTGCCAATGCAATTTCACATGTAAGGATATCTGAACCAAAGAGGAGCAAGTTGTGGGCAGTTCCAATTCATCAGCAAGGTTTATATAACATGAAGGCTAACCTCTGTAAAGCATTTTGA 1023 0.434 MNLRPKRRRPKASPDVEHSKPESLLRKKQPFLACKQIDVQRETERDISHLVMELCSGGRLVDQMFREGPCSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGEIKLADFGLAMRISKGQNLTGLAGNPAYVAPEVLLGRYSEKADIWSAGVLLHALLVGVLPFKGDSQEAVFEAIKNSKLEFQTGMWESISKPARDLVGRMLTRDISARITADEVLRHPWISFYTEHTLKILPVESKLKHQNGAACHNFVAAPEPRLGRNRMDDGFLNEVSSLSSSSESCNSEYHDVCVWIDALANAISHVRISEPKRSKLWAVPIHQQGLYNMKANLCKAF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2659g00001 340 SUPERFAMILY Protein kinase-like (PK-like) 43 266 IPR011009 -
Gabi2659g00001 340 Pfam Protein kinase domain 45 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2659g00001 340 SMART serkin_6 19 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2659g00001 340 MobiDBLite consensus disorder prediction 1 23 - -
Gabi2659g00001 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Gabi2659g00001 340 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2659g00001 340 MobiDBLite consensus disorder prediction 8 23 - -
Gabi2659g00001 340 Gene3D Transferase(Phosphotransferase) domain 1 29 269 - -
Gabi2659g00001 340 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2659g00001 Gabi-Chr2659 8690 11364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2659g00001 49 229 EF-hand Containing Proteins AT4G35310 47.283 1.12e-55 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi2659g00001 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2659g00001 - - gmx:100812729 434.491