Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2643g00031 ATGTGCGAAGCTCTGAAGAATCAATATCAACTTTTGGAGGAGATAGGGCGTGGCAGGTTCGGCACCGTGTTTCGCTGCTTTCATCTTAGTTCTAACCAATTCTATGCCTGCAAACTCATCGACAAGCGTCTCCTCACCGATTCCACCGACCAACACTGCCTTGAAATTGAGTCCAAATTCATGTCTTTCCTCTCTCCGCACCCTAATATTGTTCAAGTTTTCGACGCCTTTGAAGACACCGATTTCTTATCCATCGTCATCGACCTCTGCGAACCCCTCACTCTTTTTGACCGAATCGCCGATGGGCCCTTGCCGGAGCCCCAAGCTGCTTTTTTCATGAAGCAGCTTCTCGAAGCTGTTGCGCATTGCCACAGGGTTGGGATAGCGCACAGAGACATAAAGCCCGACAATCTATTGTTTGATTCGAGGAACAACCTTAAAGTCGCGGACTTTGGTTCGGCGGAGTGGTTCGGTGACGGAAGGAGCATGAGCGGGGTGGTGGGCACCCCGTATTACGTGGCGCCGGAGGTTCTGATGGGGAGAGAGTACAATGAGAAAGTTGATGTTTGGAGCAGCGGTGTGATTTTGTATATAATGTTGGGTGGGATTCCACCCTTTTATGGAGACTCTGCTGCTGAGATTTTTGAGGCTGTTGTGAGAGCCAATCTCAGGTTTCCAACAAGGGTTTTCAGGTCTGTGTCTTCCACTGCTAAGGATCTTCTCAGGAAGATGCTTTGTAGAGATGTCTCGAGGAGAATATCTGCAGAACAAGCCTTGAGACACCCATGGATCATAAGTGGAGGCGTGACTGGTGATCAAACTTGA 825 0.4921 MCEALKNQYQLLEEIGRGRFGTVFRCFHLSSNQFYACKLIDKRLLTDSTDQHCLEIESKFMSFLSPHPNIVQVFDAFEDTDFLSIVIDLCEPLTLFDRIADGPLPEPQAAFFMKQLLEAVAHCHRVGIAHRDIKPDNLLFDSRNNLKVADFGSAEWFGDGRSMSGVVGTPYYVAPEVLMGREYNEKVDVWSSGVILYIMLGGIPPFYGDSAAEIFEAVVRANLRFPTRVFRSVSSTAKDLLRKMLCRDVSRRISAEQALRHPWIISGGVTGDQT 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2643g00031 274 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gabi2643g00031 274 CDD STKc_CAMK 8 263 - -
Gabi2643g00031 274 FunFam Phosphoenolpyruvate carboxylase kinase 2 1 273 - -
Gabi2643g00031 274 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2643g00031 274 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2643g00031 274 SUPERFAMILY Protein kinase-like (PK-like) 5 266 IPR011009 -
Gabi2643g00031 274 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2643g00031 274 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 267 - -
Gabi2643g00031 274 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Gabi2643g00031 274 Gene3D Transferase(Phosphotransferase) domain 1 94 273 - -
Gabi2643g00031 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2643g00031 Gabi-Chr2643 280387 281777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2643g00031 3 273 EF-hand Containing Proteins AT1G50700 41.091 9.56e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi2643g00031 Pkinase 4.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2643g00031 - K08794 qsa:O6P43_007686 461.455