Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2643g00021 ATGGCGAACCGGTGGTGGACCGACTCGGTGGGTCTGGCCGGGGTTGACTACTCTTCCCCCGTCAAAAAACCGGATCTGGGTTTCTCCATGAACGATACTGCATCTTTAGCAACTGTGAACCACGGTAGTGAAGGTAAAGATGAAGAAGGAGAGGAGAAAGAAAACAGCGACGATCCCAAAGAGGTGGCCACCACGCGCAGGCCCAGGGGTCGCCCCGCGGGCTCCAAGAACAAGCCCAAACCGCCGGTGATTGTGACCAGAGACAGCCCTAACGCACTCCGAAGCCATGTCATGGAGATAGCTAACGGAACTGACATCGCTGATAGCTTGATTCAATTCGCAAGAAGGCGACAAAGAGGTGTCTGCGTTCTCAGCGCCACCGGCACAGTCACCAACGTCACTCTCCGACAGCCGACGTCCCCCGGCGCCGTCATGGCACTTCACGGCCGGTTTGACATAATATCATTGACCGGTTCGTTTCTTCCTGGACCGTCCCCACCGGGCTCGACCGGGCTAACCGTTTACATCGGCGGAGCTCAGGGACAAGTTGTGGGCGGTGGGGTGGTGGGTCCGCTGGTGGCATCAGGAATGGTTATGATAATGGCGGCTACGTTTTCGAATGCTGTATACGAGAGATTACCCATTGAGGATGAAGATCAAGAAGAAGCCCATGGGCCAGGTCGAGAGGGTTCGTCTTCGGTCTATAATGGGCAACAGTTGAACCACGAAGCTTTTTCTCCTTGGTCTCATGGTCATGGCAGGCCACCTTATTGA 774 0.5556 MANRWWTDSVGLAGVDYSSPVKKPDLGFSMNDTASLATVNHGSEGKDEEGEEKENSDDPKEVATTRRPRGRPAGSKNKPKPPVIVTRDSPNALRSHVMEIANGTDIADSLIQFARRRQRGVCVLSATGTVTNVTLRQPTSPGAVMALHGRFDIISLTGSFLPGPSPPGSTGLTVYIGGAQGQVVGGGVVGPLVASGMVMIMAATFSNAVYERLPIEDEDQEEAHGPGREGSSSVYNGQQLNHEAFSPWSHGHGRPPY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2643g00021 257 CDD DUF296 94 168 IPR005175 -
Gabi2643g00021 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 219 - -
Gabi2643g00021 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Gabi2643g00021 257 Gene3D - 93 223 - -
Gabi2643g00021 257 FunFam AT-hook motif nuclear-localized protein 93 220 - -
Gabi2643g00021 257 MobiDBLite consensus disorder prediction 218 257 - -
Gabi2643g00021 257 ProSiteProfiles PPC domain profile profile. 90 226 IPR005175 -
Gabi2643g00021 257 MobiDBLite consensus disorder prediction 231 245 - -
Gabi2643g00021 257 MobiDBLite consensus disorder prediction 13 90 - -
Gabi2643g00021 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 230 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2643g00021 Gabi-Chr2643 227350 228123 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2643g00021 1 257 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 52.508 3.07e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2643g00021 - - gmx:100795097 313.923