Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2638g00006 ATGTCTTATTCTAAAGCTAATGTAGCAGAGCAAGGGACAAATAACACAGGGTCCCAACAAAGCTCAAGGTGGAGTCCAACACCAGTTCAATTACTTGTTCTTGAGGAATTGTATAGGCAGGGAACAAAGACACCATCAGCAGAACAAATCCAGCAAATAGCATCACAGTTGCGCCAGTTTGGGAAGATTGAAGGGAAGAACGTGTTCTATTGGTTCCAAAATCACAAAGCAAGAGAGCGTCAAAAACGTCGTCGCAGGGAGATGGAGGAATATGCTTCTTCCACTCAAGGGTTGAAAGAGACAGGTTGTGAAGTTAAAGAGACAAAGAAATGGGCGCCCACTTCAAACTGCAGTGGACATGCAGAGGAATCTGTTGTACTGGATATAGCAGAAAAGGGATCTAATGGGTGGACTCAACTTGAGGAGAGAGGAATACAAGTTTTGAAGAGAAACATAGCAGAAAGGCAAACTAGGTGCCAAAATATGGAGATTTCATGCTTCCCTCCCATTACTATGGCAGCTACAACTTCAGTAGCAGCAAACAGAACACTTAACAAACAACTTTTTTGTAAGTTACCTTCCGTACTCAACAGAGAAAGCTTCAACTATTATGATGAAGAAAATATTGCTGATCCTCGGACCCTTGACCTTTTTCCACTTAAGAGGGATGACCAAGAGATGAAATCTAAGTTCTGTGCTAATGCTTCTTCTATGGACACTGAAATCGCTTGCAACAAGTTTTTTGAGTTTTTTCCTTTAAGAAACTGA 768 0.4141 MSYSKANVAEQGTNNTGSQQSSRWSPTPVQLLVLEELYRQGTKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEEYASSTQGLKETGCEVKETKKWAPTSNCSGHAEESVVLDIAEKGSNGWTQLEERGIQVLKRNIAERQTRCQNMEISCFPPITMAATTSVAANRTLNKQLFCKLPSVLNRESFNYYDEENIADPRTLDLFPLKRDDQEMKSKFCANASSMDTEIACNKFFEFFPLRN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2638g00006 255 SMART HOX_1 19 86 IPR001356 GO:0003677
Gabi2638g00006 255 SUPERFAMILY Homeodomain-like 15 85 IPR009057 -
Gabi2638g00006 255 CDD homeodomain 23 77 IPR001356 GO:0003677
Gabi2638g00006 255 Gene3D - 13 82 - -
Gabi2638g00006 255 ProSiteProfiles 'Homeobox' domain profile. 17 82 IPR001356 GO:0003677
Gabi2638g00006 255 Pfam Homeodomain 21 81 IPR001356 GO:0003677
Gabi2638g00006 255 MobiDBLite consensus disorder prediction 1 25 - -
Gabi2638g00006 255 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 9 237 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2638g00006 Gabi-Chr2638 47248 48902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2638g00006 21 123 Wox Gene Family AT3G18010 57.391 8.26e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gabi2638g00006 Homeodomain 2.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2638g00006 - - vum:124827065 358.221