Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00120 ATGGCGTCTGTTGGTGTGGCACCAACATATGGCTTGAGAGAATTCAGTGGTGTTGAAAGATTGCCAGAGGAGATGAATGATATGAAAATTACGGATGATAAAGAAGTAGAAGCTACTGTTGTTGATGGTAATGGTACCGAGACAGGACATATTATTGTAACTACCATTGGGGGTAGAAACGGTCAGCCGAAGCAGACTATAAGCTATATGGCAGAGCGGGTTGTTGGGAATGGATCATTTGGGGTTGTCTTCCAGGCTAAATGCTTGGAGACTGGTGAAACTGTGGCAATCAAAAAGGTTCTTCAGGACAAGAGGTATAAGAATAGGGAGCTGCAAACAATGCGTCTTCTTGACCACCCAAACATTGTCTCTCTGAAGCATTGTTTCTTTTCAACCACTGAAAAGGATGAACTATACCTTAATTTGGTACTTGAGTATGTTCCTGAAACAGTTCACCGTGTGATCAAACATTACAACAAGTTGAACCAACGGATGCCACTTATATATGTGAAACTCTATACATACCAGATATTTAGGGCACTATCTTATATTCACCGTTGTATTGGAGTCTGCCATCGGGATATCAAGCCTCAAAATCTATTAGTTAATCCACATACCCACCAGGTTAAATTATGTGACTTTGGAAGTGCAAAAGTCTTGATAAAAGGCGAACCAAATATTTCGTACATATGTTCTAGATATTATAGAGCACCTGAGCTTATATTTGGAGCAACTGAATATACTACAGCTATTGACATTTGGTCTGTGGGTTGTGTATTGGCTGAGCTTCTGCTTGGACAGCCTTTGTTCCCTGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGGTTCTGGGCACTCCAACAAGGGAAGAGATTAAGTGCATGAACCCTAACTATACAGAATTTAAATTCCCCCAGATTAAAGCACATCCATGGCACAAGATCTTTCAAAAGCGCATGCCTCCAGAAGCTGTTGATTTGGTATCAAGACTTCTACAATACTCCCCTAACCTGCGGTGCACAGCTTTAGATGCCTTGATCCATCCATTCTTTGATGAACTTCGTGATCCGAATACTCGCTTGCCAAATGGTCGTTTCCTTCCACCATTATTCAATTTCAAATCTCATGAACTGAAGGGAGTGCCAGTTGAGATTTTGGTGAAATTGATTCCAGAGCATGCGAGGAAGCAATGCCCGTTTCTTGGCTTGTGA 1218 0.4171 MASVGVAPTYGLREFSGVERLPEEMNDMKITDDKEVEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGNGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNIVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLIKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRCTALDALIHPFFDELRDPNTRLPNGRFLPPLFNFKSHELKGVPVEILVKLIPEHARKQCPFLGL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00120 405 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00120 405 FunFam Glycogen synthase kinase-3 beta 53 148 - -
Gabi2637g00120 405 CDD STKc_GSK3 64 356 IPR039192 -
Gabi2637g00120 405 Gene3D Transferase(Phosphotransferase) domain 1 149 397 - -
Gabi2637g00120 405 SUPERFAMILY Protein kinase-like (PK-like) 68 379 IPR011009 -
Gabi2637g00120 405 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00120 405 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 34 399 - -
Gabi2637g00120 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Gabi2637g00120 405 ProSitePatterns Protein kinases ATP-binding region signature. 75 99 IPR017441 GO:0005524
Gabi2637g00120 405 FunFam Shaggy-related protein kinase kappa 149 397 - -
Gabi2637g00120 405 Pfam Protein kinase domain 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00120 405 Gene3D Phosphorylase Kinase; domain 1 53 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00120 Gabi-Chr2637 1059298 1064247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00120 75 381 MAP Kinase Gene Family AT2G43790 35.423 3.66e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gabi2637g00120 Pkinase 7.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00120 K27413 - qsu:112005327 801.586