Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00113 ATGGGTTCTAATCTGAATGCTGAATTATCGAAGAAAACTCCAATTTTTGGTCTCAAGGTTTGGGAAGTAATTGGAATTGCAGTTGGATTGTCTATTATTGTCATCCTCTCTGCGCTCTCACTTTGCCTTACTTCAAGGAAGAAATCTAGAAAAGCCAAGGAAAAGGTTCCTCTTAGTCAAATACCAAGTGTGTCAAAGGAAATCAAGGAAGTGCGGGTTGAGCAAGTGTCAACCAATGGATTTAGTCCTCGTGATGGAATACTTCTTACCATTCATGATAAATCCAGTGACAAGGAATCAGACAAAGTCATGGTTCATTTAGGTGTGGGGAAAATGAAGAATGGGGATAGAAGCAGTCATTCCGATTCATTTCATCAAGTAGAGAAAGATGGAGGTGGGTCACAGTCACAATCAGGAGAAGAAGGTAGCTCTGGCACGGTTACAGTGTATAGGCACTCTTCTTCATACCCTATAACAGCTCCTTCACCTCTGTCTGGTCTTCCAGAATTTTCTCACTTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCTACAAACCGTTTTTCCAAAGAAAATGTCCTTGGTGAAGGTGGGTATGGAATTGTTTATCGGGGACAGTTGGTCAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACACAAAAACTTGGTTCGCCTTTTGGGATACTGCATTGAGGGAACTCACAGGATGTTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTTCATGGAGCTATGCGACACCATGGATATCTTACCTGGGAAGCACGTATAAAGATTCTCCTTGGCACAGCCAAAGCGCTTGCATATTTACATGAAGCAATTGAGCCCAAGGTGGTGCACCGAGATATCAAGTCAAGCAACATATTAATTGATGATGACTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTATTGGGTGCTGGGAAAAGTCATGTCACTACGCGAGTTATGGGAACCTTTGGATACGTGGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTATTGGAAGGAATTACTGGAAGAGATCCAGTTGACTATGGTCGGCCAACAAATGAAGTGAATCTGGTTGATTGGTTGAAGATGATGGTTGGAAACAGGAGATCAGAAGAAGTGGTGGACCCAAACGTTGAGGTGAAGCCATCAACCAGAGCTTTAAAAAGGGCACTCTTAACTGCTTTAAGATGCGTAGATCCAGATTCTGAGAAAAGGCCCAAGATGGGCCAAGTTGTACGTATGCTGGAGTCAGAGGAATACCCTTTACCAAGAGAGGACCGAAGGCACCGAAGAAATAGAGGGGGTAGTGCAGAAATTGAATCCCAGAAGGAATATTCTGACACAGACAGGAGTGAGATTCAGGGTTCTAGAGAAGAGAGCTGA 1524 0.4311 MGSNLNAELSKKTPIFGLKVWEVIGIAVGLSIIVILSALSLCLTSRKKSRKAKEKVPLSQIPSVSKEIKEVRVEQVSTNGFSPRDGILLTIHDKSSDKESDKVMVHLGVGKMKNGDRSSHSDSFHQVEKDGGGSQSQSGEEGSSGTVTVYRHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGIVYRGQLVNGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPTNEVNLVDWLKMMVGNRRSEEVVDPNVEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLPREDRRHRRNRGGSAEIESQKEYSDTDRSEIQGSREES 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00113 507 CDD STKc_IRAK 197 463 - -
Gabi2637g00113 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Gabi2637g00113 507 MobiDBLite consensus disorder prediction 113 127 - -
Gabi2637g00113 507 FunFam Putative receptor-like serine/threonine-protein kinase 267 478 - -
Gabi2637g00113 507 MobiDBLite consensus disorder prediction 111 147 - -
Gabi2637g00113 507 Gene3D Transferase(Phosphotransferase) domain 1 267 477 - -
Gabi2637g00113 507 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Gabi2637g00113 507 FunFam Putative receptor-like protein kinase 173 266 - -
Gabi2637g00113 507 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Gabi2637g00113 507 MobiDBLite consensus disorder prediction 128 147 - -
Gabi2637g00113 507 MobiDBLite consensus disorder prediction 461 507 - -
Gabi2637g00113 507 PANTHER OS01G0323000 PROTEIN 4 491 - -
Gabi2637g00113 507 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00113 507 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00113 507 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00113 507 SUPERFAMILY Protein kinase-like (PK-like) 175 470 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00113 Gabi-Chr2637 1002349 1007614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00113 168 465 Trihelix Transcription Factor Family AT1G70460 50.495 3.23e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gabi2637g00113 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00113 - - gmx:100787014 900.582