Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00108 ATGGGTGGAGGTGGAGTTACGGCCAACGCGGAGGCGCAGTACTCGTCGGCGAAGACCTCCGTGTGGTGGGACATAGAGAACTGTCATGTCCCGAAGGGTTCAGATCCACACGCCATCGCTCAGAATATCAGTTCAGCGCTTGTTCGCATGAACTATTGCGGTCCTGTTTCAATCACCGCCTATGGCGACACTACTAAGATCCCTGCCTCTGTACAGCACGCCCTCTCTAGTACCGGAATCTCCCTCAACCATGTCCCTGCAGGTGTGAAAGATGCTAGCGACAAGAAGATTCTTGTTGACATGCTGTTTTGGGCAGTGGACAATCCTGCACCTGCTAATTATTTATTAATTTCGGGTGACCGGGACTTCTCTAATGCTCTTCATCAACTGCGGATGAGGAGATATAATATTCTTCTTGCACAACCTCAGAAAGCGTCAGCACCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTCTGGACTAGTCTTTTAGCTGGCGGACCTCCTCTAACTAATGGTGAATCACAACAACTTGGTAATGGTAGCATTGGATCATCTTCTGACAGCGTACACACTCCAGTCACAAGTTCTACGCAGATACAGCAACAGCTGGGTTCCTATTCTGAAGTTCATGTGGGAAATTCGAAATTTCCAAATGGAGGAAGGGGATTTGATTCTAGATATCAAGGGAAAACGGCCTGGAGAAACCCAAGTCAACCAAATGGACCCAGAGCCATGAGTCCACCGCCGGTTGGACTTCAAGATAATCATAATAATGTATATTCTCATCGACCTGGCAATTACAATCCTAATGTTCCCCTAAGTGGATCTGCTAAAAATTTTGTTCGAGCCAATACTGATCAGTTATGGAGCAATAACGGTAATCTACAGGGCAATCGTCCAAATCCTTATCCACAGCCATTAAGATCAAACAATTTTCCATTGCAACCTCCTTTTGCCCCTAGTAATTCACGTTCTCCAAATTCCCACACTTTTGCAACTTCACCAATGCCACCGAGGACAGGTGGTCCCAACTTAACTACGGGACCACTTACAAATGTGTCAGGTATTGGTAATCTGAACATTTCTGGATATCCCAGCAGTGTCCATAATCCACTTACTGTTCAGCAACGGGGTGGAGTTTTGAAACAGAATCCTAACAGTAATGCACCACGTCCGGTAAGATCAACTGATGAACAAAATGGACTTATGGTACCTAGCAGTAGCATGCAACAATTATACCAAGGCCATCCACATGGTCCGGAATATCAACCTCCACCATTGGCAGCAATGGGTAATAATAACCTTCCTGGTAATGGTATGTGGGGATCTCCTGGATGTCCTAAACCTTCTGAATATGTCCAAGGCCTTATTGGGGTTGTTTTACTTGCCTTGAACTCACTAAAAAATGCAAAGATGTTGCCAACTGAGGCAAATATAACTGATTGCATCCGTTATGGAGATCCCAAGCACCGCAACACCGATGTTAAGAAGGCTCTGGAGAGTGCTATTGAGCAGCAGATGGTGGTGAAACAAAATTTAGGTGCTTTGCCATTGTATATCGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCTCATAGGTGGTAATCCTAAGCAGCACTCAAATGAAACTTGGGATGAAATTCAAAAGTTTTTAACAACTTCTGCTGGAAGATCGGCAATATTGGCTACCCAGTGCAAGTATGAAGCAGGTCTTGTGATAAAGAGTATGTGCTTTAAAGATCTTGCTTTGGGCGATGTTCTTCAGATATTGAACATGCTGATTACCCATAAAAAATGGATTGTGCACCATCAGTCTGGTTGGCAGCCACTTAACATTACTCTTCCTGAGACAGACCCTGACTCAGGGGTCGATGCTGGCACATAA 1887 0.4489 MGGGGVTANAEAQYSSAKTSVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSITAYGDTTKIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQLGNGSIGSSSDSVHTPVTSSTQIQQQLGSYSEVHVGNSKFPNGGRGFDSRYQGKTAWRNPSQPNGPRAMSPPPVGLQDNHNNVYSHRPGNYNPNVPLSGSAKNFVRANTDQLWSNNGNLQGNRPNPYPQPLRSNNFPLQPPFAPSNSRSPNSHTFATSPMPPRTGGPNLTTGPLTNVSGIGNLNISGYPSSVHNPLTVQQRGGVLKQNPNSNAPRPVRSTDEQNGLMVPSSSMQQLYQGHPHGPEYQPPPLAAMGNNNLPGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMLPTEANITDCIRYGDPKHRNTDVKKALESAIEQQMVVKQNLGALPLYIGKNDKLWKCVNLIGGNPKQHSNETWDEIQKFLTTSAGRSAILATQCKYEAGLVIKSMCFKDLALGDVLQILNMLITHKKWIVHHQSGWQPLNITLPETDPDSGVDAGT 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00108 628 Pfam OST-HTH Associated domain 565 613 IPR025677 -
Gabi2637g00108 628 Pfam NYN domain 18 154 IPR021139 GO:0004540
Gabi2637g00108 628 Gene3D - 9 161 - -
Gabi2637g00108 628 CDD PIN_limkain_b1_N_like 18 142 - -
Gabi2637g00108 628 MobiDBLite consensus disorder prediction 170 351 - -
Gabi2637g00108 628 MobiDBLite consensus disorder prediction 170 212 - -
Gabi2637g00108 628 MobiDBLite consensus disorder prediction 251 305 - -
Gabi2637g00108 628 MobiDBLite consensus disorder prediction 379 401 - -
Gabi2637g00108 628 PANTHER LIMKAIN B LKAP 14 510 IPR024768 GO:0005777|GO:0010468
Gabi2637g00108 628 MobiDBLite consensus disorder prediction 314 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00108 Gabi-Chr2637 952700 956771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00108 8 265 C2H2 Transcription Factor Family AT5G61190 56.977 9.73e-86 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00108 - - gmx:100794608 1098.57