Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00103 ATGGACTATCGATGGACCAATGGTAAGCAGGAAACTGGAGGGCGTGACAAGAGGCAACTTAAAAAGGAACAGGCATATCAGGACTCCCGTACTGAGGATTTGTCAGAGGATTTTCGTTTGCCAATCCGCCACAGGCCAACAGAAAATGTTGATCTGGACAATGTAGAGCAAGCATCTCTGGACACACAGTTAACATCATCTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGAATTACTGAGCCAATAAAATCTGGGATTAGAGATCCAAGGTTGGGGGTCGGCAAACAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAATATCCAGCGAAAAAAACTTGATGTTGAGTTGGAGGAGACAGAGGAACATGTGAAGAAGCGGGAGGTGGTAGCAGAACGTGAGCAAAAAATTCAAACTGAGGTGAAAGAAATTCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTGGCAATGGAATTTGAAGCGCACCTGAGCTCTTATGATCACAATCACAGAAAGCGTTTCAAACAAATGAAGGAAATGCATGGTAGTAGTAGTCGGGATGATAGGCAAAAGCGAGAACAGCAGCGCCAAGAGAGAGAAATGGCTAAGTTTGCTCAAATTGCTGATGCTCAAAAGCAGCAACAGCTTCAACTGAAACAAGAGTCTGGATCTGCACCAGTTTCCTCTGAATCTAGAACTGCTACTGCACTTACAGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCTTCTAAAAGCAGTGCTTCCAAGAGCACGGTTGGTGTCAAGAAGCAAAATGTTGCAAAGAAGCAAAATGTTTCAGTGTCCTCTGTATTTAGCAACGATAGCGATGAAGAATAA 915 0.4251 MDYRWTNGKQETGGRDKRQLKKEQAYQDSRTEDLSEDFRLPIRHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVVAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQQLQLKQESGSAPVSSESRTATALTDQEQRNTLKFGFSSKSSASKSTVGVKKQNVAKKQNVSVSSVFSNDSDEE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00103 304 MobiDBLite consensus disorder prediction 192 222 - -
Gabi2637g00103 304 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 304 - -
Gabi2637g00103 304 MobiDBLite consensus disorder prediction 83 103 - -
Gabi2637g00103 304 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Gabi2637g00103 304 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2637g00103 304 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Gabi2637g00103 304 SUPERFAMILY beta-beta-alpha zinc fingers 148 189 IPR036236 -
Gabi2637g00103 304 MobiDBLite consensus disorder prediction 225 298 - -
Gabi2637g00103 304 MobiDBLite consensus disorder prediction 9 34 - -
Gabi2637g00103 304 MobiDBLite consensus disorder prediction 192 304 - -
Gabi2637g00103 304 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
Gabi2637g00103 304 SMART G-patch_5 64 109 IPR000467 GO:0003676
Gabi2637g00103 304 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00103 Gabi-Chr2637 923951 927544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00103 1 304 C2H2 Transcription Factor Family AT5G26610 65.472 8.67e-128 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00103 - - gmx:100793206 463.381