Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00099 ATGGGAAGACACTCTTGCTGCTATAAGCAGAAGCTTCGTAAAGGCCTTTGGTCTCCAGAGGAAGACGAGAAGCTTTTGAATTACATCACCAAGCATGGACATGGATGTTGGAGCTCGGTTCCAAAATTAGCTGGTTTGCAGAGGTGTGGGAAGAGCTGCAGATTGAGGTGGATAAATTACCTAAGGCCTGATTTGAAGAGAGGAGCATTCTCACAGCAGGAAGAGAATTCCATAATTGAACTTCATGCAGTCCTTGGCAACAGGTGGTCTCAGATTGCAGCTCAGTTACCGGGAAGAACTGACAATGAGATAAAAAATCTATGGAATTCATGCCTCAAGAAGAAGCTCAGGCAAAGAGGCATTGACCCAAACACCCACCAACCACTCTCTGAGGTTGAGAACGACAAGGACAAGCCAACCATAGCTGAAAAAAGCAATCAGAAAGCCTCTGTGGAATCCAATGAGGTGAGTGTTGTTGAGCCAGCAAAACCAATTCCAACTTGTATGCCTATGGAACGATATCCCCTTGAGGTTTCTTCTACCTCCAAGAATTTGACCAACATGGATAGGTTTGGTACATGTCATGACAACTCCATCAGTACTAGTTGCAAACCTTCTGATATGGTGGGATATTTCTCTTTCCAGCACTTGAATTATGGACCTAACATGGGACTCACTGCAAATCCCAATACCTCACTTTGCTTCATGCCAAGTCCCACTTCTTCACAAATGATTACATCAGAGCTCAATTCCTCAAGTATGACTAATTCCACTATGCTCCATTCTGTGTCAAACTCCAATTTCCCAACACATGTGAAGCCAACTATTAGCCTCCATTCTCACAATCCTTCCATATCCTCTGGTGATATTGATGGGGTTCAAAACTGGGAAAACAGTACCTTCAGTAATAACAATGCAAGCAAAAGCAATGGGAGCAGTAACAGCATCCAATTACAAAGCAACACTAACTTCCTTGATAGCAGCACTCTGACGTGGGGGTTGGCAGAGTCTTGTGCAAAGGCTGATAAAGATGTTCATGTACTACCTTTACAAGCAGAACAAGAAGACATTAAATGGTCTGAGTATCTTAACACCCCGTTTTTTATGGGAAACACAGTGCACAATCAAACCACTCAGTGTATCTACGGTGATGAGAATAAAGCAGAAACAGGTTTCATTACAGACGAAACAAGTACTAATTGGCACCATAGCCAGCATTTTCAACCTTCAGATATATATACCAAAGATCTACAGAGATTTTCAGTGGCTTTTGGACAAACTCTGTAG 1287 0.4266 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENSIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHQPLSEVENDKDKPTIAEKSNQKASVESNEVSVVEPAKPIPTCMPMERYPLEVSSTSKNLTNMDRFGTCHDNSISTSCKPSDMVGYFSFQHLNYGPNMGLTANPNTSLCFMPSPTSSQMITSELNSSSMTNSTMLHSVSNSNFPTHVKPTISLHSHNPSISSGDIDGVQNWENSTFSNNNASKSNGSSNSIQLQSNTNFLDSSTLTWGLAESCAKADKDVHVLPLQAEQEDIKWSEYLNTPFFMGNTVHNQTTQCIYGDENKAETGFITDETSTNWHHSQHFQPSDIYTKDLQRFSVAFGQTL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00099 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Gabi2637g00099 428 SMART sant 66 114 IPR001005 -
Gabi2637g00099 428 SMART sant 13 63 IPR001005 -
Gabi2637g00099 428 MobiDBLite consensus disorder prediction 119 158 - -
Gabi2637g00099 428 FunFam MYB transcription factor 68 140 - -
Gabi2637g00099 428 MobiDBLite consensus disorder prediction 129 143 - -
Gabi2637g00099 428 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gabi2637g00099 428 CDD SANT 17 61 IPR001005 -
Gabi2637g00099 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Gabi2637g00099 428 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Gabi2637g00099 428 Gene3D - 11 67 - -
Gabi2637g00099 428 Gene3D - 68 150 - -
Gabi2637g00099 428 MobiDBLite consensus disorder prediction 296 315 - -
Gabi2637g00099 428 PANTHER MYB DOMAIN PROTEIN 55 1 328 - -
Gabi2637g00099 428 CDD SANT 69 109 IPR001005 -
Gabi2637g00099 428 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gabi2637g00099 428 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gabi2637g00099 428 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gabi2637g00099 428 FunFam Myb transcription factor 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00099 Gabi-Chr2637 863759 865328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00099 1 428 MYB Transcription Factor Family AT1G09540 48.182 4.92e-121 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi2637g00099 Myb_DNA-binding 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00099 K09422 - gmx:100788976 603.594