Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00090 ATGGCGTGGTGGAAGCTAGGAAAGAAGAGAATATATATGAATTTCACTAGAGCTTTGACTACAATGCCAGTTAGGCATGTGGCAGGGTCAAGCTTTACACCTATCTTTGTGGCACAATCTATTTATGCATCAGCAAGATGCATGCCAGATTTCATCAGCCAGTCATCTCTTGGAATGGCTGGTTTTTGCAGTGGGACTAAAGAATGTGGAATACGGTGCTTCCATTCTAGCTCTCAAGTCTGGGCAAGTGTTGATGAATTTGGTTTGAAGACCCAAAGGAAGGAAAAGTATGTGAGAAGGGACAGAAGCCAACCACCTGTTGAAGCTCCATATGTCCCTCGTAATGTCCAAGCTATCAAATCTAATCCTGACAAAACAGTAGAAATATTTGAAGGCATGACCCTTGTTGAACTGGCAAAGCGTACTGGAAAATCAATATCTTCTTTGCAGGATATCCTCACAAATGTTGGTGAAAAGATTGAATCAGAGTTTGAGCCTCTGGGCATGGATATTGCAGAGCTTGCTGCAATGGAGGTTGGTGTCAATGTCAAGAGGCTACATTCAGCTGAAGGTGCAGAAATTTTACCACGTCCTGCAGTTGTAACAGTGATGGGTCATGTTGATCATGGTAAAACTTCTCTTCTTGATGCTTTGCGTCAAACATCAGTGGCAGCCAAGGAGGCTGGTGGCATAACTCAGCATCTAGGTGCTTTTGTGGTGGTCATGCCTACAGGAGCTGCAATCACATTTCTTGACACTCCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGCGCAGCAGTCACAGATATAGTAGTGCTAGTTGTTGCTGCTGATGATGGCATGATGCCTCAAACACTGGAAGCCATGTCCCATGCAAAGGCAGCTAATGTACCAATGGTAGTTGCAATTAATAAATGTGATAAACCAGGTGCAAATCCTGAAAGAGTAAAACTGCAGCTTGCTTCAGAGGGTTTGGTGCTGGAGGAGATGGGTGGGGATGTTCAGGTTGTTGAAGTCTCAGCAACTGCAAAAACTGGAATGGATAACCTAGAGGAAGCTTTACTCCTTCAGGCTGATATGATGGATCTGAAAGCACGATTTGATGGGCCTGCTCAAGCATATGTGGTGGAAGCAAGACTTGACAAAGGACGGGGTCCATTGGTAACTACTATAGTGAAGGCAGGGACTCTAGTTTGTGGCCAGCATGTGGTTGTAGGCTCACAGTGGGGAAGAATAAGAGCTATTAAAGATATGGCAGGGAGGTTAACTCAGCGAGCAACACCTGCAATGCCTGTTGAGATTGAAGGGCTTCGAGGGCTACCGATGGCTGGTGATGACGTTATCGTTGTTCAGTCCGAGGAGCGAGCTAGAATGCTTAGTTCTGGTAGGAAAAAGAAATCTGAGGAGGACAGGCTTAGGAGTAAGATGATCCAGGACAAGCCAACTACTTCAGATGATTCTGAGGAGGTTCCGCAGTGGGTTGAAATGCCAGTAATAGTAAAAGCAGATGTTCAGGGAACTGTTCAAGCTGTCACAGATGCATTGAGAACTTTAAATAGTTCTCAGGTTTTTGTGAATGTTGTCCATGTTGGCGTCGGGCCTATTTCTCAATCTGATGTGGACTTAGCACAGGCTTGTGGTGCATGCATTGTAGGATTCAATGTCAAGAGTCCACCTACTTCTCTGAACCAGGCAGCCACTCGTGCCAGTATAAAGGTAATTAGGCACAGCGTAATTTACCACCTCTTGGAGGACATAGGCAAATTGATAATAGAGAAGGCCCCTGGGACTTCTGAGACCAAGGTAGCTGGACAGGCAGAAGTGCTGAATATCTTTGAAGTCAAAGGTAGCAAGTCCAAGGGACCTGATGTTAAGATAGCTGGTTGTCGGGTTGTTGATGGTTTTCTGAGCAGTTCAGGAACCATGAGGCTTCTTAGGAGTGGGGAAGTTGTGTTTGAAGGACTTTGTGCATCTCTTAAGAGGGAGAAGCAGGATGTGGATACTGTCAAGAAGGGAAATGAGTGTGGATTAGTAATCAGTAATTGTTATGATTTTCAGATTGGAGACGTCATCCAATGCTTGGAACAAGTTGTTAGGAAGCCCAAGTTCATCAAGTCTGAGAGTGGTGCTGTTCGAATTGAGTGCTGA 2154 0.4526 MAWWKLGKKRIYMNFTRALTTMPVRHVAGSSFTPIFVAQSIYASARCMPDFISQSSLGMAGFCSGTKECGIRCFHSSSQVWASVDEFGLKTQRKEKYVRRDRSQPPVEAPYVPRNVQAIKSNPDKTVEIFEGMTLVELAKRTGKSISSLQDILTNVGEKIESEFEPLGMDIAELAAMEVGVNVKRLHSAEGAEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVVMPTGAAITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGMMPQTLEAMSHAKAANVPMVVAINKCDKPGANPERVKLQLASEGLVLEEMGGDVQVVEVSATAKTGMDNLEEALLLQADMMDLKARFDGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQHVVVGSQWGRIRAIKDMAGRLTQRATPAMPVEIEGLRGLPMAGDDVIVVQSEERARMLSSGRKKKSEEDRLRSKMIQDKPTTSDDSEEVPQWVEMPVIVKADVQGTVQAVTDALRTLNSSQVFVNVVHVGVGPISQSDVDLAQACGACIVGFNVKSPPTSLNQAATRASIKVIRHSVIYHLLEDIGKLIIEKAPGTSETKVAGQAEVLNIFEVKGSKSKGPDVKIAGCRVVDGFLSSSGTMRLLRSGEVVFEGLCASLKREKQDVDTVKKGNECGLVISNCYDFQIGDVIQCLEQVVRKPKFIKSESGAVRIEC 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00090 717 FunFam Translation initiation factor IF-2 193 368 - -
Gabi2637g00090 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 387 IPR027417 -
Gabi2637g00090 717 SUPERFAMILY Translation proteins 601 702 IPR009000 -
Gabi2637g00090 717 CDD IF2_mtIF2_II 372 467 IPR044145 -
Gabi2637g00090 717 Hamap Translation initiation factor IF-2 [infB]. 8 703 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Gabi2637g00090 717 MobiDBLite consensus disorder prediction 460 491 - -
Gabi2637g00090 717 Gene3D Translation factors 369 485 - -
Gabi2637g00090 717 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 196 366 IPR000795 GO:0003924|GO:0005525
Gabi2637g00090 717 CDD IF2_eIF5B 200 363 - -
Gabi2637g00090 717 MobiDBLite consensus disorder prediction 460 488 - -
Gabi2637g00090 717 Pfam Elongation factor Tu GTP binding domain 201 357 IPR000795 GO:0003924|GO:0005525
Gabi2637g00090 717 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 489 606 IPR036925 -
Gabi2637g00090 717 Pfam Translation-initiation factor 2 491 588 IPR023115 -
Gabi2637g00090 717 NCBIfam small GTP-binding protein domain 199 352 IPR005225 GO:0005525
Gabi2637g00090 717 FunFam Translation initiation factor IF-2 494 599 - -
Gabi2637g00090 717 SUPERFAMILY Translation proteins 370 452 IPR009000 -
Gabi2637g00090 717 NCBIfam translation initiation factor IF-2 124 700 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Gabi2637g00090 717 FunFam Translation initiation factor IF-2 601 704 - -
Gabi2637g00090 717 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 115 711 IPR015760 -
Gabi2637g00090 717 Gene3D Translation factors 600 702 - -
Gabi2637g00090 717 CDD mtIF2_IVc 606 695 - -
Gabi2637g00090 717 Gene3D - 194 368 IPR027417 -
Gabi2637g00090 717 Gene3D - 494 598 IPR036925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00090 Gabi-Chr2637 775590 782218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00090 187 681 Eukaryotic Initiation Factors Gene Family AT1G76810 27.531 2.54e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00090 K02519 - gmx:100781314 1187.17