Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00068 ATGGGAAGGCACTCTTGTTGTTACAAGCAGAAGCTTAGGAAGGGTCTTTGGTCACCTGAAGAGGATGAAAAACTTTTGAGGCATATAACGAAGTATGGTCATGGATGTTGGAGCTCAGTTCCTAAGCAAGCTGGTTTGCAGAGGTGTGGTAAGAGCTGCAGGCTTAGGTGGATCAACTACTTGAGGCCTGATTTAAAGAGAGGTACATTTTCACAAGAAGAGGAAAATCTTATCATTCAACTTCATGCAGTATTAGGGAATAGATGGTCTCAAATTGCAGCACAATTGCCAGGGAGGACTGACAATGAAATTAAGAATATGTGGAATTCTTGCTTAAAGAAGAAACTCAGGCAAAGAGGTATAGATCCTGTCACCCATAAACCACTGTCTGAGGTTGAGACTGGAGAGGAGGACAAAAACAGGAGCCAAGAGAAAGTACCCAATGAATTGAACCTCCTGAAATCAGAGAGCTCCAAGTCAGATACAGTTTCCTATGAGAAGTTACCATCTTCAATTTCCCCAAAAGCCTATGCAACCGAGATGGAAGGTTCTTCCAGCTCCAAGATTAACAGCAAAAATGACAGCAACTTGAGAACCACTTTTTCCAGTAAAGACTTGTTCCTTGACAGGTTTATGACTTCTCACCAAGAGAGCTACACCACTAATTGCCAACCCTCTAATTTGATGATGGGAAATTACCCCCTTCAGATGAGTTATGCATCCTCTGACACTCTCCCAAACAATTCAAACTCTAGTCTTTGGTTCAACCAAACTGGAAGGCCATTTGATATGAACTCTGAATTTAATTCCAACGTTATGTCCATTCTTCCAACTACAACTAGCTCATTTCTCCCTAGTTCCTTTTGCTACAAGCCATCCCTTGCTGTCCCCCCAGAAGATGTTTCTACATCCTCTTTTATGGTGAATGGATCACATTACTGGGAAGCCAGTGCCTCCAACAATAGCAATAGCAGCAATACTAGTAATGAGGCTCAAATTCATCTGATGGAAGGGCAGACAGAAGAAGCTAAGTGGTGTGAGTACCTTCACAACCCAATGTTAATGCTGGCAGCTGCACAAAATCAAGGTCATGAATCTTTATGCAACGAGATAAAGCCTGCCACGCATTTGGTACCTGATACTTTAGGGGCCATATATCCTCATTCCAAGCAGCAAGAACCGTCACAAATGGTCATTCAGAAGCTAACAGCAGCATTTGGACATATATAG 1230 0.4244 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIQLHAVLGNRWSQIAAQLPGRTDNEIKNMWNSCLKKKLRQRGIDPVTHKPLSEVETGEEDKNRSQEKVPNELNLLKSESSKSDTVSYEKLPSSISPKAYATEMEGSSSSKINSKNDSNLRTTFSSKDLFLDRFMTSHQESYTTNCQPSNLMMGNYPLQMSYASSDTLPNNSNSSLWFNQTGRPFDMNSEFNSNVMSILPTTTSSFLPSSFCYKPSLAVPPEDVSTSSFMVNGSHYWEASASNNSNSSNTSNEAQIHLMEGQTEEAKWCEYLHNPMLMLAAAQNQGHESLCNEIKPATHLVPDTLGAIYPHSKQQEPSQMVIQKLTAAFGHI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00068 409 Gene3D - 11 67 - -
Gabi2637g00068 409 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gabi2637g00068 409 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gabi2637g00068 409 MobiDBLite consensus disorder prediction 146 167 - -
Gabi2637g00068 409 FunFam Myb transcription factor 11 67 - -
Gabi2637g00068 409 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gabi2637g00068 409 SMART sant 13 63 IPR001005 -
Gabi2637g00068 409 SMART sant 66 114 IPR001005 -
Gabi2637g00068 409 CDD SANT 17 61 IPR001005 -
Gabi2637g00068 409 PANTHER MYB DOMAIN PROTEIN 55 1 341 - -
Gabi2637g00068 409 FunFam MYB transcription factor 68 140 - -
Gabi2637g00068 409 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gabi2637g00068 409 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gabi2637g00068 409 Gene3D - 68 149 - -
Gabi2637g00068 409 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Gabi2637g00068 409 CDD SANT 69 109 IPR001005 -
Gabi2637g00068 409 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gabi2637g00068 409 MobiDBLite consensus disorder prediction 122 145 - -
Gabi2637g00068 409 MobiDBLite consensus disorder prediction 122 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00068 Gabi-Chr2637 583479 585252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00068 1 145 MYB Transcription Factor Family AT4G01680 89.655 1.51e-96 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi2637g00068 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00068 K09422 - gmx:100037467 550.821