Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2637g00068 | ATGGGAAGGCACTCTTGTTGTTACAAGCAGAAGCTTAGGAAGGGTCTTTGGTCACCTGAAGAGGATGAAAAACTTTTGAGGCATATAACGAAGTATGGTCATGGATGTTGGAGCTCAGTTCCTAAGCAAGCTGGTTTGCAGAGGTGTGGTAAGAGCTGCAGGCTTAGGTGGATCAACTACTTGAGGCCTGATTTAAAGAGAGGTACATTTTCACAAGAAGAGGAAAATCTTATCATTCAACTTCATGCAGTATTAGGGAATAGATGGTCTCAAATTGCAGCACAATTGCCAGGGAGGACTGACAATGAAATTAAGAATATGTGGAATTCTTGCTTAAAGAAGAAACTCAGGCAAAGAGGTATAGATCCTGTCACCCATAAACCACTGTCTGAGGTTGAGACTGGAGAGGAGGACAAAAACAGGAGCCAAGAGAAAGTACCCAATGAATTGAACCTCCTGAAATCAGAGAGCTCCAAGTCAGATACAGTTTCCTATGAGAAGTTACCATCTTCAATTTCCCCAAAAGCCTATGCAACCGAGATGGAAGGTTCTTCCAGCTCCAAGATTAACAGCAAAAATGACAGCAACTTGAGAACCACTTTTTCCAGTAAAGACTTGTTCCTTGACAGGTTTATGACTTCTCACCAAGAGAGCTACACCACTAATTGCCAACCCTCTAATTTGATGATGGGAAATTACCCCCTTCAGATGAGTTATGCATCCTCTGACACTCTCCCAAACAATTCAAACTCTAGTCTTTGGTTCAACCAAACTGGAAGGCCATTTGATATGAACTCTGAATTTAATTCCAACGTTATGTCCATTCTTCCAACTACAACTAGCTCATTTCTCCCTAGTTCCTTTTGCTACAAGCCATCCCTTGCTGTCCCCCCAGAAGATGTTTCTACATCCTCTTTTATGGTGAATGGATCACATTACTGGGAAGCCAGTGCCTCCAACAATAGCAATAGCAGCAATACTAGTAATGAGGCTCAAATTCATCTGATGGAAGGGCAGACAGAAGAAGCTAAGTGGTGTGAGTACCTTCACAACCCAATGTTAATGCTGGCAGCTGCACAAAATCAAGGTCATGAATCTTTATGCAACGAGATAAAGCCTGCCACGCATTTGGTACCTGATACTTTAGGGGCCATATATCCTCATTCCAAGCAGCAAGAACCGTCACAAATGGTCATTCAGAAGCTAACAGCAGCATTTGGACATATATAG | 1230 | 0.4244 | MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIQLHAVLGNRWSQIAAQLPGRTDNEIKNMWNSCLKKKLRQRGIDPVTHKPLSEVETGEEDKNRSQEKVPNELNLLKSESSKSDTVSYEKLPSSISPKAYATEMEGSSSSKINSKNDSNLRTTFSSKDLFLDRFMTSHQESYTTNCQPSNLMMGNYPLQMSYASSDTLPNNSNSSLWFNQTGRPFDMNSEFNSNVMSILPTTTSSFLPSSFCYKPSLAVPPEDVSTSSFMVNGSHYWEASASNNSNSSNTSNEAQIHLMEGQTEEAKWCEYLHNPMLMLAAAQNQGHESLCNEIKPATHLVPDTLGAIYPHSKQQEPSQMVIQKLTAAFGHI | 409 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2637g00068 | 409 | Gene3D | - | 11 | 67 | - | - | |
Gabi2637g00068 | 409 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Gabi2637g00068 | 409 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Gabi2637g00068 | 409 | MobiDBLite | consensus disorder prediction | 146 | 167 | - | - | |
Gabi2637g00068 | 409 | FunFam | Myb transcription factor | 11 | 67 | - | - | |
Gabi2637g00068 | 409 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Gabi2637g00068 | 409 | SMART | sant | 13 | 63 | IPR001005 | - | |
Gabi2637g00068 | 409 | SMART | sant | 66 | 114 | IPR001005 | - | |
Gabi2637g00068 | 409 | CDD | SANT | 17 | 61 | IPR001005 | - | |
Gabi2637g00068 | 409 | PANTHER | MYB DOMAIN PROTEIN 55 | 1 | 341 | - | - | |
Gabi2637g00068 | 409 | FunFam | MYB transcription factor | 68 | 140 | - | - | |
Gabi2637g00068 | 409 | Pfam | Myb-like DNA-binding domain | 67 | 111 | IPR001005 | - | |
Gabi2637g00068 | 409 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Gabi2637g00068 | 409 | Gene3D | - | 68 | 149 | - | - | |
Gabi2637g00068 | 409 | SUPERFAMILY | Homeodomain-like | 12 | 108 | IPR009057 | - | |
Gabi2637g00068 | 409 | CDD | SANT | 69 | 109 | IPR001005 | - | |
Gabi2637g00068 | 409 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Gabi2637g00068 | 409 | MobiDBLite | consensus disorder prediction | 122 | 145 | - | - | |
Gabi2637g00068 | 409 | MobiDBLite | consensus disorder prediction | 122 | 167 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2637g00068 | Gabi-Chr2637 | 583479 | 585252 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2637g00068 | 1 | 145 | MYB Transcription Factor Family | AT4G01680 | 89.655 | 1.51e-96 | 287 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gabi2637g00068 | Myb_DNA-binding | 1.9e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2637g00068 | K09422 | - | gmx:100037467 | 550.821 |