LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi2637g00063	ATGGAGGACCGACAACAACACAACCACCGTGGATTGAGCTTCTTAAGCTCCGGCGACTTCATCCGCCACAAAGATCCTCCCCTCAAGGAAATGGATTTCTTCTCTTCAGGTAATAATAATAATAATAATAATACTAACAATACCAATGGTACTAATGATAATCCTCAGCAAAAGCATGATCAGAATCAAGATGGCCGTAACAGCATCACCAACGGTGGATCATCAGAACTCCTTACTGATCATTCTGTAAACATTGGGTTGAATTTAACGTGTGCAAGTGCTGGAATTTCAAGAGAAGCAAATGTTCAAAATCCTGAAACTGAGATGAGAACACTTGAAAGTGAATTGCGGAGACTACAAGAAGAGAATCACAAGTTGAGAATAGTGCTGGACCAGATCACCAAAAGTTATAGCCAACTACAAGCTCAACTGTTCATCACTATGCAGAAACAAAAGCCTCGTCAGAATATGGAAGCAAATGGGATGGTGGTGTTGGGACAAAAATTTGTGGACCCACGGAAATGCACGAAATTAGACGTCAATGAAGCATCGGTTTCTGATGACAAGACTGATGGAGAGGGTTGTCGTAATCCCGCAGAAGATGTTCCTGACCGGTCGTCCTCACAGAGTTGGAACTCATCCAAAAGCCCCAAGTTAGAAGAATCCAAAACTGGAGAACAAGTTGCCGGTGACCTTCCTTTCAGAAAAGCCCGGGTTTCCGTACGTGCAAGATCAGAAGCTCCCCTGATTAGCGATGGATGTCAGTGGAGGAAATATGGGCAAAAAATAGCAAAGGGTAACCCTTGTCCTCGTGCCTACTATCGTTGCACTATGGCCGTAGGGTGCCCAGTCCGCAAGCAGGTGCAAAGATGCGCAGAGGACAAGACAGTGCTGATAACAACTTACGAAGGAAATCACAACCATCCTCTGCCACCATCTGCTACTGCAATGGCAAATACAACTTCAGCAGCTGCGGCTATGCTCTTATCAGGTTCATCCTCATCAACACTGAGCAAGGAAGCGTTAACAACGACCTCTGCAGGATATTTCTCTTCAATCCCTTATGCTTCAGTGGCAACCCTATCAGCTTCTGCACCATTCCCAACTATCACACTAGACTTGACCCAGAACCCAAGTGCCATGCAGCTGCACCAAGCACAATACCCAGGGGTTACATTCCCTCTGCCATTGCATCATGCAGCTGCAGCTGCTGGTCCTCAACTACTAGGGCACCCTTTGTTCTTCTCTCATAAGCTACCACCTGCAGCTTTACCCCTATTTCAACTAGGACAACGACAACCTTCATCTATGGTTGAATCTGTGAGTGCAGCCATTGCTTCGGATCCGAACTTCACTGCAGCCTTGGCCGCAGCTATCACGTCGATTATTGGGGCACCAATAGGGAGTGATGGTAATAATAATAATAATATTAGTAACAATGGAAGTAATATAGCTCTTAATGGGATACCTGAATTGCCTGGGTCACCTCAGCTTCCTCATTCATGCACTACATTTTCCACCAACTAG	1527	0.4551	MEDRQQHNHRGLSFLSSGDFIRHKDPPLKEMDFFSSGNNNNNNNTNNTNGTNDNPQQKHDQNQDGRNSITNGGSSELLTDHSVNIGLNLTCASAGISREANVQNPETEMRTLESELRRLQEENHKLRIVLDQITKSYSQLQAQLFITMQKQKPRQNMEANGMVVLGQKFVDPRKCTKLDVNEASVSDDKTDGEGCRNPAEDVPDRSSSQSWNSSKSPKLEESKTGEQVAGDLPFRKARVSVRARSEAPLISDGCQWRKYGQKIAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPSATAMANTTSAAAAMLLSGSSSSTLSKEALTTTSAGYFSSIPYASVATLSASAPFPTITLDLTQNPSAMQLHQAQYPGVTFPLPLHHAAAAAGPQLLGHPLFFSHKLPPAALPLFQLGQRQPSSMVESVSAAIASDPNFTAALAAAITSIIGAPIGSDGNNNNNISNNGSNIALNGIPELPGSPQLPHSCTTFSTN	508

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi2637g00063	508	MobiDBLite	consensus disorder prediction	1	20	-	-
	Gabi2637g00063	508	MobiDBLite	consensus disorder prediction	202	218	-	-
	Gabi2637g00063	508	MobiDBLite	consensus disorder prediction	181	200	-	-
	Gabi2637g00063	508	MobiDBLite	consensus disorder prediction	26	77	-	-
	Gabi2637g00063	508	Pfam	WRKY DNA -binding domain	252	309	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Gabi2637g00063	508	ProSiteProfiles	WRKY domain profile.	245	311	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Gabi2637g00063	508	Coils	Coil	102	136	-	-
	Gabi2637g00063	508	MobiDBLite	consensus disorder prediction	488	508	-	-
	Gabi2637g00063	508	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	96	476	IPR044810	GO:0003700
	Gabi2637g00063	508	SUPERFAMILY	WRKY DNA-binding domain	243	311	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Gabi2637g00063	508	FunFam	probable WRKY transcription factor 31	235	312	-	-
	Gabi2637g00063	508	SMART	WRKY_cls	250	310	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Gabi2637g00063	508	MobiDBLite	consensus disorder prediction	181	228	-	-
	Gabi2637g00063	508	Gene3D	WRKY domain	235	312	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Gabi2637g00063	508	MobiDBLite	consensus disorder prediction	33	77	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi2637g00063	Gabi-Chr2637	496682	500252	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi2637g00063	95	463	WRKY Transcription Factor Family	AT4G04450	42.822	2.29e-86	271

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Gabi2637g00063		WRKY	5.3e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi2637g00063	-		-	gmx:100783661	512.301