Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00058 ATGAGGCCTGAGAATGTTATGGATGAAGAAGTGCATACAAACGGGGAAAAGAGAGAAAAGAGCAAAGGGAAAGAAAAACCTGAAACTGTTCCTTATCACAGGCTGTTCTCATTTGCAGACTCCATTGACATGCTGTTGATGATTGTTGGCACCATTGGGGCCATTGGAAATGGTGTGAGTTTGCCTCTCATGTCATTGCTGTTTGGCCAAATGATTAATAGCTTCGGAAATAACCAGTTTAGCCCAGACATTGTCAAGCAAGTTTCCAAGGTCTCTCTTAAATTCGTATATTTGGGAATAGGCAGTGCTGTGGCTGCATTCCTCCAGGTGGCTTGCTGGATGGTCACAGGGGAGAGACAGGCAGCAAGAATAAGAGGCTTGTATTTGAAAACTATACTGAGACAAAATATTACTTTCTTTGATAAGGAAACTAACACTGGAGAGGTGATAGGGCGAATGTCAGGTGACACTGTTCTCATACAAGATGCCATGGGAGAGAAGGTAGGGAAATTTCTGCAGCTAGTAGCAACATTCTTTGGTGGCTATGTGATAGCTTTTATCAAAGGGTGGCTTCTTACTCTTGTCATGTTGTCCACTCTTCCACCTCTTGTCGCTTCTGGCGCTGCTATGGTCTTTACCATTGGAAGGACGGCATCCAGAGGTCAAACCGCGTACGCTAAAGCTGCACATGTAGTTGAACAAGCAATTGGCTCAATAAGAACTGTCGCATCCTTTACTGGGGAAAAGAAAGCAGTATCTAGTTACAGAAAATTTCTTGTAGATGCTTACAAATCAGGAGTTCGTGAAGGTTTTGTAGCCGGAATCGGTCTTGGCATGGCTATGTTATTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGAGCAAAGATGATAATGGAAAAAGGGTATGATGGGGGTGCGGTGAGCACTGTGATTGTTGCTGTGTTAACAGCTTCCATGTCACTCGGCCAGGCATCTCCTTGCATGAGTGCTTTTGCTGCGGGCCAAGCTGCAGCTTATAAAATGTTTCAGACAATTGAGAGAAAGCCAGAGATAGATGCCTATGACCCAAATGGAAAAATATTGAAGGATATCCATGGTGAAATAGATTTAAGGGATGTTTATTTCAGTTATCCAGCCAGACCTGAGGAGTTGATTTTCAACGGATTCTCTCTTCATATATCTAGCGGCACCACTGCAGCTTTAGTAGGACAAAGTGGAAGTGGAAAATCTACAGCTATCAGTTTAATAGAAAGATTTTACGATCCACAGGCAGGTGAAGTTCTTATTGATGGTATTAACGTGAAAGAATTTCAGCTTAGATGGATCAGAGGAAAAATTGGCCTCGTTAGCCAGGAGCCCGTGTTGTTTGCATCTAGCATTAAGGATAACATTGAATATGGGAAGGAGGGAGCAACAATTGAAGAGATAAGAGCTGCAGCTGAACTTGCAAATGCTGCTAAGTTCATTGATAAACTGCCACAGGGATTGGACACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGTGGACAAAAGCAGCGCGTTGCCATTGCAAGAGCAATCCTGAAAGATCCAAGAATTCTACTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAGTCTGAAAGGATAGTGCAAGAGGCTCTAGACAGGATCATGGTCGACAGAACCACTGTTGTTGTTGCACATCGCCTGAGCACAGTGAGGAATGCTGATATGATTGCTGTAATTCATAGAGGGAAAATGGTTGAGAAAGGAACACACATAGAATTACTCAAGGATCCCGAGGGAGCTTACTCTAATCTTATACGTTTACAAGAAGTGAACAAGGAATCAGAAGAAACTGCAGATAATCAAAACAAGAGTGAACTTTCTTCAGAATCCTTTAAACGATTGAGTCAAAGAAGGTCACTTCGAAGATCAGGATCATCTGTGGGGAATAGTAGCCGCCACTCATTTTCAGCTTCATTTGGTTTACCTGCAGGAATTAACGTCCCTGATCCTGAACTTGGAAATTCACAGCCCAAAGAACAATCACCACCAGAGGTTTCACTCTGGCGCCTTGCTTCCATCAACAAGCCAGAGATTCCAGTGCTTCTGATTGGATGTGTAGCAGCTATAGTAAATGGTACCATACTTCCAATATATGGCGTGTTGCTTTCCAGTGTCATCAAAACATTATATGAACCATTTCCTGAGATGAAAAAGGATTCCAAGTTTTGGGCACTAATGTTTATGACCCTTGGACTTGCATCCTTAGTGGCAATTACAGCCCGAGGTTACTTTTTCTCTGTGGCTGGCAGTAAGTTAATCCAACGTATCAGGCTAATTTGTTTTGAGAAGGTGATCAACATGGAGGTTGGTTGGTTTGATGAGCCTGAACACTCAAGTGGTGCAATTGGTGCAAGGCTCTCAGCAGATGCTGCATCTGTGCGTGCCCTTGTTGGTGATGCACTGGGACTATTGGTTCAAAATATAGCAACAGCATTGGCAGGTTTGATCATTGCTTTCATTGCAAGCTGGCAGTTGTCGTTTATTATTCTTGTCTTGCTTCCCCTCACTGGAATAAGTGGATATTTTCAAATGAAGTTCTTGGCGGGATTCAGTGCAGATGCAAAGATGATGTATGAGGAAGCTAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTAGCTTCTTTCTGTGCTGAAGAGAAAGTTATGGAACTATACAGGAAGAAATGTGAAGGTCCCATGAAAACTGGGATACGACAAGGCTTGATCAGTGGAACAGGATTTGGGGTTGCATTTTTCTTACTCTTTAATATCTATGCTACCAATTTCTATGCAGGAGCAAGATTTGTGGAAGCTGGCAAGGCATCATTCTCAGATGTTTTCCGGGTTTTCTTTGCTTTAACTATGGCAGCTGTTGGAATTTCCCAATCAAGCTCCTTAGCTCCTGATTCTAGCAAAGCCAAGACAGCCACTGCTTCCATATTTGAAATAATCGATAGGAAGTCAGAGATAGATCCCAATGATGAGTCTGGTAGCACACTGGATAGCGTGAAGGGAGAAATAGAGCTTCTTAATGTAAGGTTTAAGTATCCATCTAGGCCAGATATACAAATTTTTCGAGACCTTAGCTTGACTATCCATTCTGGCAAGACTGTGGCCCTTGTTGGTGAAAGTGGAAGTGGGAAATCCACAGTGATTGCCTTGTTACAGAGATTTTATGATCCTGATTCTGGTCAAATTACACTTGATGGGATAGAAATTCAGAAGTTACAACTCAAGTGGTTAAGGCAGCAGATGGGCCTTGTAAGCCAAGAGCCAGTCCTGTTCAATGACACTATCCGTGCCAATATTGCCTATGGAAAGGAAGGCAATGCAACTGAAGCAGAAATCCTAACAGCAGCAGAACTGGCCAATGCCCATAGTTTTATCAGTGGTTTACAACAGGGTTATGATACAGTGGCGGGAGAGAGGGGAATCCAAATATCCGGGGGGCAAAAGCAAAGGGTAGCCATTGCACGTGCTATAATTAAAAGTCCTAAGATATTGCTGCTAGATGAAGCCACAAGTGCACTAGATGCCGAGTCAGAGAGGGTTGTTCAAGATGCATTAGACAGAGTGATGGTGAGCAGGACCACTGTGGTTGTGGCACATCGTCTATCTACAATAAAAAATGCAGATGTGATTGCAGTAGTAAAAAATGGAGTTATAGTGGAGAAAGGAAGGCATGAGACGCTCATTAACGTTAAGGATGGATTTTATGCTTCCTTAGTCCAACTTCACGCAAGTGCTTCAGCAATATGA 3807 0.4295 MRPENVMDEEVHTNGEKREKSKGKEKPETVPYHRLFSFADSIDMLLMIVGTIGAIGNGVSLPLMSLLFGQMINSFGNNQFSPDIVKQVSKVSLKFVYLGIGSAVAAFLQVACWMVTGERQAARIRGLYLKTILRQNITFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLVATFFGGYVIAFIKGWLLTLVMLSTLPPLVASGAAMVFTIGRTASRGQTAYAKAAHVVEQAIGSIRTVASFTGEKKAVSSYRKFLVDAYKSGVREGFVAGIGLGMAMLFIFCGYALAVWFGAKMIMEKGYDGGAVSTVIVAVLTASMSLGQASPCMSAFAAGQAAAYKMFQTIERKPEIDAYDPNGKILKDIHGEIDLRDVYFSYPARPEELIFNGFSLHISSGTTAALVGQSGSGKSTAISLIERFYDPQAGEVLIDGINVKEFQLRWIRGKIGLVSQEPVLFASSIKDNIEYGKEGATIEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVDRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHIELLKDPEGAYSNLIRLQEVNKESEETADNQNKSELSSESFKRLSQRRSLRRSGSSVGNSSRHSFSASFGLPAGINVPDPELGNSQPKEQSPPEVSLWRLASINKPEIPVLLIGCVAAIVNGTILPIYGVLLSSVIKTLYEPFPEMKKDSKFWALMFMTLGLASLVAITARGYFFSVAGSKLIQRIRLICFEKVINMEVGWFDEPEHSSGAIGARLSADAASVRALVGDALGLLVQNIATALAGLIIAFIASWQLSFIILVLLPLTGISGYFQMKFLAGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPMKTGIRQGLISGTGFGVAFFLLFNIYATNFYAGARFVEAGKASFSDVFRVFFALTMAAVGISQSSSLAPDSSKAKTATASIFEIIDRKSEIDPNDESGSTLDSVKGEIELLNVRFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGIEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGNATEAEILTAAELANAHSFISGLQQGYDTVAGERGIQISGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVSRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINVKDGFYASLVQLHASASAI 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00058 1268 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1023 1260 IPR003439 GO:0005524
Gabi2637g00058 1268 FunFam ABC transporter B family member 1 681 989 - -
Gabi2637g00058 1268 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 335 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi2637g00058 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1014 1261 IPR027417 -
Gabi2637g00058 1268 Pfam ABC transporter 389 537 IPR003439 GO:0005524
Gabi2637g00058 1268 Coils Coil 604 624 - -
Gabi2637g00058 1268 MobiDBLite consensus disorder prediction 640 654 - -
Gabi2637g00058 1268 ProSitePatterns ABC transporters family signature. 1163 1177 IPR017871 GO:0005524|GO:0016887
Gabi2637g00058 1268 Gene3D - 368 625 IPR027417 -
Gabi2637g00058 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 608 IPR027417 -
Gabi2637g00058 1268 SMART AAA_5 1050 1243 IPR003593 GO:0016887
Gabi2637g00058 1268 SMART AAA_5 397 569 IPR003593 GO:0016887
Gabi2637g00058 1268 FunFam ABC transporter B family member 1 1013 1263 - -
Gabi2637g00058 1268 MobiDBLite consensus disorder prediction 612 654 - -
Gabi2637g00058 1268 Gene3D ABC transporter type 1, transmembrane domain 93 997 IPR036640 GO:0005524|GO:0016020
Gabi2637g00058 1268 FunFam ABC transporter B family member 1 360 609 - -
Gabi2637g00058 1268 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 370 606 IPR003439 GO:0005524
Gabi2637g00058 1268 SUPERFAMILY ABC transporter transmembrane region 688 1008 IPR036640 GO:0005524|GO:0016020
Gabi2637g00058 1268 Pfam ABC transporter transmembrane region 47 320 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi2637g00058 1268 Pfam ABC transporter transmembrane region 701 973 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi2637g00058 1268 CDD ABC_6TM_Pgp_ABCB1_D2_like 691 1006 - -
Gabi2637g00058 1268 MobiDBLite consensus disorder prediction 1 27 - -
Gabi2637g00058 1268 Gene3D - 1013 1267 IPR027417 -
Gabi2637g00058 1268 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 702 988 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi2637g00058 1268 CDD ABC_MTABC3_MDL1_MDL2 370 608 - -
Gabi2637g00058 1268 CDD ABC_MTABC3_MDL1_MDL2 1023 1261 - -
Gabi2637g00058 1268 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 331 - -
Gabi2637g00058 1268 SUPERFAMILY ABC transporter transmembrane region 28 354 IPR036640 GO:0005524|GO:0016020
Gabi2637g00058 1268 FunFam ABC transporter B family member 9 34 365 - -
Gabi2637g00058 1268 Pfam ABC transporter 1042 1191 IPR003439 GO:0005524
Gabi2637g00058 1268 ProSitePatterns ABC transporters family signature. 509 523 IPR017871 GO:0005524|GO:0016887
Gabi2637g00058 1268 PANTHER ABC TRANSPORTER B FAMILY 13 610 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00058 Gabi-Chr2637 460442 465813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00058 30 1262 Calmodulin-binding Proteins AT2G36910 44.266 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00058 K05658 - gmx:100802547 2081.22