Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00055 ATGGAGGATGAACCTTTTCTGAAAACCTCCCAAATCACAGAGCGTTGCGATTTACCCTTGGCAGCTTCCAAATCCTTCAACTATGTTACCACGTTGCAGGAAGCCCGACGAGAACAAGAGGTAGTAGAGACAGAAACCTCATCTGAACAACAACAACAACAACAACAACCATTGCATCCGAGGAAGAAACTGAGTCGCTGCAAGACTGCCCCAGCCATGGTTGTTATGCGAGACCTCAAACCCAAGACACCCGAAGTTCCGAAACCTCAGAGTAATAGCATAATAAGACAAGGCATTTGCTTGCTTATCATATACCTCTCTGTAGGAGTTGCCATATACTCTTTCAACAGAGACAATTTTTCTGGCATCGAAACTCACCCTGTAATCGATGCCCTTTACTTTTGTATCGTTACCATGTGTACCATAGGTTACGGGGACATAGCTCCTTTAACCCCAGTTACAAAGGTTTTTGCTTGCGTCTTTGTGTTGGTGGGGTTTGGATTCATTGACATACTCCTTAGTGGGCTTGTAAATTTCGTCCTAGATTTGCAAGAGAATATGATCCTAACGGGACTCCAAATGGGTGCTCGTAGAGGTTTCTCAGCGAGGAATTACATTGTTGATGTGGCAAAGGGTAGGATGAGGATCAGATTGAAGGTTGGTTTGGCACTTGGTGTTGTGGTTCTGTGTATTGGGATTGGGAGTTTGGTGTTGTATTTTGTTGAGGGTTTGGATTCGGTTGATTCCATTTACTTATCGGTTATGTCTGTTACAACAGTTGGTTATGGTGATCGAGCCTTCAAGACCCTTCCGGGTCGGTTATTTGCAGCTATTTGGCTGCTCTTTTCTACATTGATGGTGGCACGGGCATTCCTCTATTTGGCAGAGGCCAGAATTGATAGAAGGCATCGGAGAATGGCCAAGAAAGTCTTGCATAGACAAATAACTGTCGATGATTTGCTAACTGCAGATATCAACAACAATGGTTTTATTAGTAAGTCAGAGTATATAATCATGAAGCTGAAAGAGATGGGTAAAATACAGGAAAAAGATGTATTGCAAATTTGTGACCAATTCAGGAAGCTTGACCCCTCTAACTGTGGGAAGATAACATTATCTCATATATTGGAGAGTCAATCATGA 1143 0.4278 MEDEPFLKTSQITERCDLPLAASKSFNYVTTLQEARREQEVVETETSSEQQQQQQQPLHPRKKLSRCKTAPAMVVMRDLKPKTPEVPKPQSNSIIRQGICLLIIYLSVGVAIYSFNRDNFSGIETHPVIDALYFCIVTMCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNFVLDLQENMILTGLQMGARRGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEGLDSVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHRQITVDDLLTADINNNGFISKSEYIIMKLKEMGKIQEKDVLQICDQFRKLDPSNCGKITLSHILESQS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00055 380 SUPERFAMILY EF-hand 322 375 IPR011992 -
Gabi2637g00055 380 FunFam Two-pore potassium channel 5 83 193 - -
Gabi2637g00055 380 FunFam Two-pore potassium channel 3 203 317 - -
Gabi2637g00055 380 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 126 353 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi2637g00055 380 Coils Coil 32 52 - -
Gabi2637g00055 380 ProSitePatterns EF-hand calcium-binding domain. 324 336 IPR018247 -
Gabi2637g00055 380 MobiDBLite consensus disorder prediction 45 60 - -
Gabi2637g00055 380 SUPERFAMILY Voltage-gated potassium channels 210 317 - -
Gabi2637g00055 380 Pfam Ion channel 101 180 IPR013099 -
Gabi2637g00055 380 Pfam Ion channel 228 296 IPR013099 -
Gabi2637g00055 380 SUPERFAMILY Voltage-gated potassium channels 91 180 - -
Gabi2637g00055 380 MobiDBLite consensus disorder prediction 37 66 - -
Gabi2637g00055 380 Gene3D - 74 191 - -
Gabi2637g00055 380 Gene3D - 203 322 - -
Gabi2637g00055 380 PRINTS Two pore domain K+ channel signature 137 165 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi2637g00055 380 PRINTS Two pore domain K+ channel signature 258 267 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00055 Gabi-Chr2637 446723 449408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00055 31 376 Ion Channels AT4G01840 66.667 4.55e-165 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00055 K05389 - gmx:100780438 572.778