Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00051 ATGAAAGGAAAAATAATTGTCTCTGTTGTTTCTCTCATCCTCGTGGTAGGTGTTGCTATTGGAGTTGTTGTTGCCGTTCACAAGAAGAATGATGACCCTGAGGTTCAAGCTCAACAGAGGTCTCTGAGTGTTATATGCCAAAACGCAGAGGACAAAAAGCTCTGCCATGAAACTCTTAAATCCGTGACAGGGATTGAAGCCGCAGACCCAAAGGCTTACATAGCGGCAGCTGTGAAAGCAACCACTGACAGTGTCATCAAGGCCCTTAACATGAGTGATAGGCTCACAACTGAGCATGGAAACAAGGACAATGGCATTAAAATGGCCCTTGATGATTGCAAGGACCTTTTGCAATTCGCCATGGACAGTCTCCAACTCTCCATGAATTTGGTGAAAGAAAACAACATTCAATCCGTGCATAACCAAACCCCTGATTTCAGGAACTGGTTGAGTGCTGTTATCTCATACCAACAAACATGCATGGATGGTTTTGACGATGACAAAGACGGTGAGAAAAAGATCAAGGAACAGTTGAACGAGCAGAGTTTGGACCAAGTTGGTAAGATCACTGGCGTCACCCTTGACATCGTGAGTGGTTTGTCCAACATCCTCGAACAATTCAACTTGAAGTTCGATATTAAACCTGCCTCTCGTCGTCTTCTCGAGGTTGATAGCCAAGGTTTCCCAACATGGTTCTCTGCTGCTGATCGCAAACTCTTGGCTAAGATGAACGGCAGAGGTTGGAGATCACGTGTCAAGCCAAATGTTGTTGTTGCCAAGGATGGTAGTGGTCAATTCAGAACCGTCAAGGATGCTATTGCCTCGTACCCTAACGGCTTCAAAGGTAGATACACTATCTACGTTAAGGCTGGTGTCTATGATGAGTACATCACCGTTCCCAAGGAAGCTGTTAATCTTCTCATGTATGGTGATGGCCCTCAAAGAACCATTATCACCGGTCACAAGAACTTCCGTGATGGTACCAAGACCATGCAAACCGCCACCTTCGCCAACACTGCTAATGGATTCATTGCAAAGGCAATGACATTCGAGAACACAGCTGGTCCTGATGGTCATCAAGCTGTGGCACTTAGAAACCAGGGAGATATGTCAGCTTTCGTTGGTTGCCATATATTGGGTTACCAAGACACCTTGTACGTTCAGACCAACAGGCAATTCTACCGCAACTGTGTGATCTCTGGCACCATTGACTTCATCTTTGGCACATCCCCAGCCTTGATCCAACACTCAGTCATCATTGTGAGGAAGCCAAATGACAACCAATTCAACACAGTTACCGCTGATGGTACATCTCAGAAGAACATGGGCACAGGTATTGTTATCCAGAATAGTGACATTGTCCCAGAACAAGCATTGTTCCCAGTGAGGTTCAAGATCAATTCCTACTTGGGAAGGCCATGGAAGCAATTCTCAAGGACAGTTGTTATGGAATGCAATTTGGGTGACTTTATTCATCCAGAGGGATGGTTTCCATGGGCAGGGTCAAGTTTCCTTGACACCTTGTACTATGCTGAGTACAATAACGCTGGACCTGGTGCCAATGTTCAGAGAAGGATCAAGTGGAAGGGTTACCGTGGCCTCATTAGCAAGGCTGAAGCTACCCAATTCACCGCTGGTGAATTCCTCAAGGCTGGACCTCGCTCCGGAACTGATTGGTTGAAGGCTCTTCATGTTCCTCATAACCTTGGCTTCACAAAAGCTTAA 1725 0.4597 MKGKIIVSVVSLILVVGVAIGVVVAVHKKNDDPEVQAQQRSLSVICQNAEDKKLCHETLKSVTGIEAADPKAYIAAAVKATTDSVIKALNMSDRLTTEHGNKDNGIKMALDDCKDLLQFAMDSLQLSMNLVKENNIQSVHNQTPDFRNWLSAVISYQQTCMDGFDDDKDGEKKIKEQLNEQSLDQVGKITGVTLDIVSGLSNILEQFNLKFDIKPASRRLLEVDSQGFPTWFSAADRKLLAKMNGRGWRSRVKPNVVVAKDGSGQFRTVKDAIASYPNGFKGRYTIYVKAGVYDEYITVPKEAVNLLMYGDGPQRTIITGHKNFRDGTKTMQTATFANTANGFIAKAMTFENTAGPDGHQAVALRNQGDMSAFVGCHILGYQDTLYVQTNRQFYRNCVISGTIDFIFGTSPALIQHSVIIVRKPNDNQFNTVTADGTSQKNMGTGIVIQNSDIVPEQALFPVRFKINSYLGRPWKQFSRTVVMECNLGDFIHPEGWFPWAGSSFLDTLYYAEYNNAGPGANVQRRIKWKGYRGLISKAEATQFTAGEFLKAGPRSGTDWLKALHVPHNLGFTKA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00051 574 SMART PMEI_2 37 196 IPR006501 GO:0004857
Gabi2637g00051 574 Pfam Pectinesterase 255 550 IPR000070 GO:0030599|GO:0042545
Gabi2637g00051 574 FunFam Pectinesterase 249 571 - -
Gabi2637g00051 574 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Gabi2637g00051 574 FunFam Pectinesterase 38 201 - -
Gabi2637g00051 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 201 IPR035513 -
Gabi2637g00051 574 Pfam Plant invertase/pectin methylesterase inhibitor 44 195 IPR006501 GO:0004857
Gabi2637g00051 574 CDD PMEI-like_3 45 202 - -
Gabi2637g00051 574 NCBIfam pectinesterase inhibitor domain 8 196 IPR006501 GO:0004857
Gabi2637g00051 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 200 IPR035513 -
Gabi2637g00051 574 SUPERFAMILY Pectin lyase-like 251 565 IPR011050 -
Gabi2637g00051 574 Gene3D - 249 571 IPR012334 -
Gabi2637g00051 574 PANTHER PECTINESTERASE 15 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00051 Gabi-Chr2637 419372 421408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00051 1 571 Carbohydrate Esterase AT2G47030 39.934 9.38e-142 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00051 K01051 - gmx:100781507 861.292