Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00047 ATGAGTTGTTTCAGCTGTTGTGAAGAAGATGAATTCCCAAAGAGTGCCGAAAGTGGAGGACAGAATGTGCCCATTGAAGTTCCTGATATACCGGTGGATGAACTAAAAGATATTACAGATAGCTTTGGAGAAAGTTCTCTGATTGGAGAGGGATCCTACGGAAGAGTATATCATGGTGTTCTTAAAAGTGGGCAGGCTGCAGCAATCAAGAAATTAGATGCCAGTAAACAGCCCGATGAGGAATTTTTAGCCCAGGTTTCAATGGTTTCACGGCTGAAGCATGACAATTTTGTTCAATTACTTGGTTATTGTGTTGATGGAAACTCCCGAGTTCTTGTGTATGAGTTTGCGTCTAATGGGTCTCTACATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCTGTTCTGACGTGGGCACAGAGAGTTAAAATTGCTGTAGGGGCTGCAAAAGGGCTTGAGTACTTGCATGAGAGGGCTGATCCCCACATTATCCACCGGGACATCAAGTCAAGCAATGTACTAATCTTTGATGACGATATTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGTCTTCATTCCACCCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGGCAATTGAATGCTAAGAGCGATGTATACAGTTTTGGTGTTGTCCTTCTTGAACTTTTGACTGGAAGGAAGCCTGTTGATCATACACTACCACGTGGGCAGCAGAGCCTGGTTACTTGGGCTACACCAAAACTCAGTGAGGATAAAGTCAGACAGTGTGTAGATGTAAGACTAGGAGGAGATTACCCGCCCAAAGCTGTGGCTAAGATGGCTGCTGTTGCTGCGCTGTGTGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGAATGCAAGACCTGGACCTGCTGGTGAAACACCAAACTAG 1005 0.4428 MSCFSCCEEDEFPKSAESGGQNVPIEVPDIPVDELKDITDSFGESSLIGEGSYGRVYHGVLKSGQAAAIKKLDASKQPDEEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRVLVYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAAKGLEYLHERADPHIIHRDIKSSNVLIFDDDIAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDVRLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETPN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00047 334 PIRSF ILK 13 325 - -
Gabi2637g00047 334 FunFam pto-interacting protein 1 118 329 - -
Gabi2637g00047 334 FunFam PTI1-like tyrosine-protein kinase 3 7 116 - -
Gabi2637g00047 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Gabi2637g00047 334 Gene3D Phosphorylase Kinase; domain 1 9 116 - -
Gabi2637g00047 334 Gene3D Transferase(Phosphotransferase) domain 1 117 326 - -
Gabi2637g00047 334 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 21 326 - -
Gabi2637g00047 334 SUPERFAMILY Protein kinase-like (PK-like) 24 318 IPR011009 -
Gabi2637g00047 334 SMART serkin_6 42 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00047 334 CDD STKc_IRAK 48 321 - -
Gabi2637g00047 334 Pfam Protein tyrosine and serine/threonine kinase 47 318 IPR001245 GO:0004672|GO:0006468
Gabi2637g00047 334 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Gabi2637g00047 334 ProSiteProfiles Protein kinase domain profile. 42 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00047 Gabi-Chr2637 394974 397659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00047 4 325 Receptor kinase-like Gene Family AT3G58690 47.840 2.25e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gabi2637g00047 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00047 K13436 - gmx:100817460 607.06