Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00036 ATGGACGATTGTTGTGCTGTTTGCGCTGAGCCCTTGGAATGGGTTGCTTACGGACCCTGTTTGCACCGCGAGGTGTGCTCCACGTGCGTTGCACGCCTCCGTTTCATATTCGACGATCGCCGTTGCTGCATCTGCAAGACCGAATGCAACCTCATATTCGTTACCAAGGCTCTAGGAGATTATACAAGGATGATTAATGACTTTTCGGCCCTGCCCCTTGAGGTAAGGGAGGGCAAGGTTGGATCATACTGGTACCACGAGGATACAAATGCATTTTTCGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTTTCATGCACTGTGTGTGACAAGATGGAGGAGCAACCACATGATGCTTCAAGGCGACGAGCGAGGTTTAGGAATATTGGACAGCTGAAGGGTCACTTATTCCACCGTCATAAGTTGCAAATGTGCAGTTTGTGTTTGGAGGGAAGGAAGGTATTTATATGTGAGCAAAAACTATATACTAGAGCACAGCTGAATCAACACATAAGCACAGGTGATTCTGAGGTAGATGGAACTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCCATGTGTGAATTCTGCAGAACCCCATTTTATGGGGACAATGAACTATACACGCATATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCGGGACAATATGAATACTATAAGAATTATGATGATCTCGAGATCCATTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCCAAGAAATTTATTGTTTTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCTACCGAACATGGAGGGCGAATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCAACTAGCTTTCGATACAGACATGGTAATGAACAGGACCAGCGCCGTGGAAGAAGTCGTACTTTTCGTCGTGATTTTTCTGAAAATCAGCTTTCTATGGCCATTGAAGCCAGTTTGGAGACAGCTAATGCAGAGCAAACATTTCATGATCCGTTGACATCAAGTAGTGGACAAGTTGCTTTTGATGATGAGAATGCTGATATTGATTCTATCATTCAGCCATTTGAATCGTTAGCTACAGCAGGTTCTGAATCATCTTCAAGATACCTTCAAGCCTTAGGGCATAGCTCTAATAGTGCACCTCTGGAAGATTCTTCCTTTCCTCCGCTGCCCATAACTTCCAGCAATGGCCAGCAAAGGTCCAAACATGAGTTGGAAGGTTCATCTAGTAACACTATGGCAGCACGTTTGCGCCGGCATGGCAAAAAAAATGTATCTGTTATTAATTCTGGTAATGCCTGGCCAGCAGCTGGTCGTGGACTGCTTCAATCATCAAGTAATCCTTCACAATCTAAACCATCCACAAATATTGCTCTTGGAGTGTCTCGAAATTCTGGTCAGATGAAGACGGTAATTAGTGGTGGGCTTTCGCAGTCAACTTATGCTAGTTCTATTCAGGCTACACATAGAACCACTCATGGACAATTACCTGCTGGTTCCTTGAGGGACACACGGGACAATGATAGAATCGTTCACTCTACATCTGCTCCAAATCTCACTGTGAACAACCATGTTGAAGTTTCAATTGCTGATTTCCCTCCAGTTTCTGCTGCACAAGTGAGTAGGTTACCTACGAGCAGCCAGTCTTTGTTGAATGTGGAGAATGTCCAGTCTGCTAACAAGTCCTTGGTTGAGAAGATTCGTGGTGCTCTTGATTTTGATGAAGAAAGGTATTCTTTATTTAAAGACATATCTGCTCAATATCGCCAAGGCACAATAGATACAGATACATATCTTGACTATGTGCAGCAGTTTGGCTTGTCTCATATTGTACTTGAGTTAGCAAGACTATGCCCGGACCCTCGGAAGCAGAAAGAGCTTGTTGAGTCTTACAATGCTAGTTTGAAAAGAAATAGTTTAAAAGAGAATGATTGGGTTCGGAGTAGCACTAGCACCGATCGCAAAGACAGTAATGTCAACAAGAAAGGTAAAGGTAAGTCTGTAAGTGGTAGTGGGAGTGACTCCACAGAGAGATTAGCAGATAGCTTTTTAAGCAAAGTACATCAACTCCAGTCAAGTTATAAACCTCCAGAAGAGAAGTTGGAGGTGCTATCGAGGGGTGATTACCGCACTGACAAAGGCAAATTAAACATCGAGCGGCAGTTTGAAACAAACTCCGGTACTCAACCTATGATGAAGCTTAGCAGGCAGACAGAGACATCAAATGGAAGTTTATCTAATCAAAGTAGAGAGGATGGTGGTGGCAGCAAGCAACGCAAGAAAACCTCCAAGTTCATCAGAGTGCGCCTAGGTGATGGTTCTGTTTCGGCCCTTCTAGATTTTGAAAATTCACGCACCGAATCAGATCCTGGAACAACAGACAGTTTAGAAGGTAACAAGGATTCTGGAGAAGGGCTGCCTGTGCGAGGTGTTTGGCGAAGTGGGGGAGGTCATAAACTCTTTTCCTAA 2514 0.4411 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFIFDDRRCCICKTECNLIFVTKALGDYTRMINDFSALPLEVREGKVGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCTVCDKMEEQPHDASRRRARFRNIGQLKGHLFHRHKLQMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQEHFLCEDEACLAKKFIVFQSEAEMKRHNATEHGGRMSRSKRNAALQIPTSFRYRHGNEQDQRRGRSRTFRRDFSENQLSMAIEASLETANAEQTFHDPLTSSSGQVAFDDENADIDSIIQPFESLATAGSESSSRYLQALGHSSNSAPLEDSSFPPLPITSSNGQQRSKHELEGSSSNTMAARLRRHGKKNVSVINSGNAWPAAGRGLLQSSSNPSQSKPSTNIALGVSRNSGQMKTVISGGLSQSTYASSIQATHRTTHGQLPAGSLRDTRDNDRIVHSTSAPNLTVNNHVEVSIADFPPVSAAQVSRLPTSSQSLLNVENVQSANKSLVEKIRGALDFDEERYSLFKDISAQYRQGTIDTDTYLDYVQQFGLSHIVLELARLCPDPRKQKELVESYNASLKRNSLKENDWVRSSTSTDRKDSNVNKKGKGKSVSGSGSDSTERLADSFLSKVHQLQSSYKPPEEKLEVLSRGDYRTDKGKLNIERQFETNSGTQPMMKLSRQTETSNGSLSNQSREDGGGSKQRKKTSKFIRVRLGDGSVSALLDFENSRTESDPGTTDSLEGNKDSGEGLPVRGVWRSGGGHKLFS 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00036 837 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 735 767 - -
Gabi2637g00036 837 ProSiteProfiles Rhodanese domain profile. 422 458 IPR001763 -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 678 692 - -
Gabi2637g00036 837 CDD RING-HC_ZNF598 3 53 IPR041888 -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 454 474 - -
Gabi2637g00036 837 PANTHER ZINC FINGER PROTEIN 598 1 740 IPR044288 GO:0061630|GO:0072344
Gabi2637g00036 837 SMART c2h2final6 220 250 IPR013087 -
Gabi2637g00036 837 SMART c2h2final6 196 219 IPR013087 -
Gabi2637g00036 837 SMART c2h2final6 108 144 IPR013087 -
Gabi2637g00036 837 SMART c2h2final6 251 280 IPR013087 -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 453 474 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 703 722 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 727 837 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 658 677 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 708 722 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 299 321 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 658 692 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 303 320 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 389 427 - -
Gabi2637g00036 837 MobiDBLite consensus disorder prediction 794 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00036 Gabi-Chr2637 332831 337710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00036 1 837 C2H2 Transcription Factor Family AT3G62240 52.914 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00036 K22381 - gmx:100780426 1390.17