Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00006 ATGGAAAAGAAAGATATGAAAGGCGTGAAGATGGAGGATGACGCCATTGGATCTTCATCGCTCCATGGTTATCCATTCCCGAGCATGTTTGATTTCTCTGAAGTGGAAAAGAGCTCCTTAGGGTTTATGGAGTTACTGGGTGTGCATGACTATAGTTCTTCTATGCTTGATTTGCCTCTAGTGTCAACCATGTCTATGGCTCATAACTCTGCTCTTAAGGAGACTGGAAAAGAGTGTTCCGAGGTATTGAACCAGCAACCTGCCACTCCAAATTCTTCATCGATTTCATCTGCGTCCAGTGAGGCAGTCAATGATGAACAGAATAAAACTGTAGACCAAGCACATGAACATCAAAAGTTCAAGAAACAGTTGAAGGTGAAGAAGACAAATCAGAAGGGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATTTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAGAATAGCCCCTTTCCTAGGAGCTATTATCGTTGCACTAGTGCTTCATGTAATGTGAAGAAACGCGTGGAGCGATCTTTTACTGATCCAAGTGTTGTGGTGACAACCTACGAAGGTCAACACACACATCCAAGTCCAATTATGGCTCGCTCAGGCCTCGCCGGATCTACAATATCACCAGGTGTCTCCGCCGTAATGCCTGCAGGAAACTACATGTCCCAATATTATCAGAACCATCAACAAGTCTTTGTCAATAAATTGTGGTCTTTGGGTTTCCCTTCTTCAAAGAATGCTTCTTTTCCTCAAGAGAGACCTCTTTGTAATCCCGGGGCGACTGCATTGTTAAAGGACCATGGGCTTCTTCAAGATGTGGTACCTTCACATATGTTCAAACAAGAGTAG 894 0.4407 MEKKDMKGVKMEDDAIGSSSLHGYPFPSMFDFSEVEKSSLGFMELLGVHDYSSSMLDLPLVSTMSMAHNSALKETGKECSEVLNQQPATPNSSSISSASSEAVNDEQNKTVDQAHEHQKFKKQLKVKKTNQKGQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHTHPSPIMARSGLAGSTISPGVSAVMPAGNYMSQYYQNHQQVFVNKLWSLGFPSSKNASFPQERPLCNPGATALLKDHGLLQDVVPSHMFKQE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00006 297 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 234 IPR044810 GO:0003700
Gabi2637g00006 297 PIRSF WRKY_txn_fact_IIc 1 297 IPR017396 GO:0003700
Gabi2637g00006 297 ProSiteProfiles WRKY domain profile. 145 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2637g00006 297 FunFam WRKY transcription factor 57 136 210 - -
Gabi2637g00006 297 MobiDBLite consensus disorder prediction 76 133 - -
Gabi2637g00006 297 Gene3D WRKY domain 134 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2637g00006 297 MobiDBLite consensus disorder prediction 79 107 - -
Gabi2637g00006 297 Pfam WRKY DNA -binding domain 151 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2637g00006 297 SMART WRKY_cls 150 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2637g00006 297 SUPERFAMILY WRKY DNA-binding domain 142 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00006 Gabi-Chr2637 106282 108025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00006 28 297 WRKY Transcription Factor Family AT2G47260 46.319 4.33e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2637g00006 WRKY 1.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00006 - - aprc:113872234 400.593