Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2637g00001 ATGCCAATCGGTATATTGAAAAAGGTTCAAGGCATGTTGCTGAAAGGGATGCTTATGTTATCTTGCCTGGTATTTATCACTGAGTCTTCAGCTAGATCACTTTTGAACTCTGTTGTTGTACGTGATCTACCACTACCAGCAAATCTCCATGTTTCTCGTGGTGCACCAATGGCGGCACTGTCACCATCCAATCCCCCTTCCTATGGTCATTTCATAAGTACTGATCAACCCCCTGCAAGTTCACATTTACCCATACCATTCAAGAAGAGGGGCGAATTGAAACCTCCAATTTCTGGCCGTAAAGGTATTTCTCCAATGTATTCTACTGCAGCTGCAGTCCCTTCTGCTTTGGCTCAGCCACCGTTGTCCCCTTATTCTTCCAATTGTTGTAAACAAGACATGGTGTTGAAACGAGACAGTAAGAGTTGCCACTGTGTGTATCCCATAAAGCTAGATCTTCTTCTTCTGAATGTATCTCAAAATCCTAATTGGAATGTTTTTCTTGATGAATTAGCTACACAGCTTGGGTTGCAAAGTAACCAGATTGAACTGATAAACTTTTATGTACTCAGCTTATCAACATTAAATATATCGATGGATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAATGATGCATCTAAAATAAAATCTTCGCTTTTAATGCATAAGGTTCAACTTAACCCTGGATTAGTGGGTGAATACAAACTTCTCAGTATAACGTGGTTTGAACCTCCACCTCCTGCTCAAGCTCCCACTTTAGCTGCATGGCCTGTGAAAGCTCCTATGTATCATTCACCTACAGCTACATCGTCGAGTTTTTCAAATACGGGAAGGAATTCAAATTTGTTTCTTATTCTTGGAATTGCTACTGGCACACTCTTCATTGCTATTGTATCTGTGCTTTTATTCTGTTTATGTGTGTTGGTACCGAAGACAAAAACACCTCCCATAGAAACTGAAAAGCCTAGGACAGAAAGTGTAGTTTCAGCTGTAGGTTCTCTTCCCCACCCAACCACCAGTACACGATTTATTGCTTATGAAGAACTTAAAGAAGCGACAAACAATTTTGAACCTGCAAGCATACTTGGAGAAGGAGGGTTTGGTAGGGTTTTTAAAGGTGTCTTAAATGATGGTACTTCTGTAGCAATTAAAAGGCTTACAAATGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGTAGGTTGCACCATCGTAACCTTGTGAAACTAGTGGGATACTATAGTAATCGTGACTCATCACAAAATCTACTTTGCTATGAACTTGTCCCTAATGGAAGTTTGGAAGCCTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTTGATGCAGCAAGAGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGACTTGCTAAGCAGGCACCTGAAGGCAATTGTAATTATTTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTGGAACTGCTTACTGGAAGGAAACCTGTGGATATGTCACAATCAACTGGACAAGAGAACCTTGCTACTTGGGCTAGGCCAATCCTTAGAGATAAGGACCGGTTGGACGAGATTGCTGATCCAAGACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTACGAGTTTGCACAATTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGCGAAGTAGTACAATCACTTAAGATGGTGCAGCGCATCACAGAATATCAAGATTCTGTGTTAGCCTCATCCAATACACGGGCCAACCTGAGACAGTCCTCTAGCACTTTTGAGTTTGATGGAACATCTTCGATGTTCTCTTCAGGTCATTACTCCGGTCTAAGTGGCTTTGACAATGACAACATTTCTAGGACGGTGATTTACTCTGAAGATCTTCATGAAGGACGATAA 2109 0.4206 MPIGILKKVQGMLLKGMLMLSCLVFITESSARSLLNSVVVRDLPLPANLHVSRGAPMAALSPSNPPSYGHFISTDQPPASSHLPIPFKKRGELKPPISGRKGISPMYSTAAAVPSALAQPPLSPYSSNCCKQDMVLKRDSKSCHCVYPIKLDLLLLNVSQNPNWNVFLDELATQLGLQSNQIELINFYVLSLSTLNISMDITPHKGISFSANDASKIKSSLLMHKVQLNPGLVGEYKLLSITWFEPPPPAQAPTLAAWPVKAPMYHSPTATSSSFSNTGRNSNLFLILGIATGTLFIAIVSVLLFCLCVLVPKTKTPPIETEKPRTESVVSAVGSLPHPTTSTRFIAYEELKEATNNFEPASILGEGGFGRVFKGVLNDGTSVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGNCNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQSTGQENLATWARPILRDKDRLDEIADPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITEYQDSVLASSNTRANLRQSSSTFEFDGTSSMFSSGHYSGLSGFDNDNISRTVIYSEDLHEGR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2637g00001 702 FunFam Receptor-like serine/threonine-protein kinase ALE2 337 435 - -
Gabi2637g00001 702 FunFam Receptor-like serine/threonine-protein kinase ALE2 436 653 - -
Gabi2637g00001 702 Pfam Protein kinase domain 361 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00001 702 CDD STKc_IRAK 364 634 - -
Gabi2637g00001 702 PANTHER OS01G0750732 PROTEIN 125 650 - -
Gabi2637g00001 702 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Gabi2637g00001 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Gabi2637g00001 702 ProSiteProfiles Protein kinase domain profile. 358 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2637g00001 702 Gene3D Transferase(Phosphotransferase) domain 1 436 657 - -
Gabi2637g00001 702 Gene3D Phosphorylase Kinase; domain 1 340 435 - -
Gabi2637g00001 702 SUPERFAMILY Protein kinase-like (PK-like) 337 635 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2637g00001 Gabi-Chr2637 12683 19139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2637g00001 12 702 Receptor kinase-like Gene Family AT4G02010 67.701 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gabi2637g00001 Pkinase 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2637g00001 - - gmx:100793528 1157.9