Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2635g00004 ATGGGATTCTGGGGGATTGAAGTGAAACCTGGCAAACCGTATCCTTATCATGCAGACAATGTGCAAGGAAAACTTCACGTGACTCAGGCTACTCTAGGCATTGGCTCGTCGACAGAGAAAAGCATTCTTCAGTGCTCTTCTGGACACAAAAGTCCAGTTTTCTTGTGTTCACTGCTACCAAATATGAGTGAGTCATGCCCTTTGAATCTTGAGTTTGACGATGATGACTTAGTGGCATTCTCAGTGATCGGTTCACGAAGCATCCATCTTTCTGGTTATTTTGTGGCCGATGATGGGGATGATCTTAGAGATGACTATGAATATGATTCATTGGGAGAGGATATTGTGGGAACTGAGACAGAGGAATCATCTGAATATGATAGTGAAGATGATGAATATGATGATGACTTTTTCAATGATGATGATATTAACTTGTACCAATCTTCGCCAGTCCAAAATCGTGGAGTTGTAATTGAGGAAATAGTGGAAGATGATAAACCTGAAAATGGAGATGATTCAACTAAGAAATTGATGAAAAAGAAACAAGTAGCTCCCTCGAAAGAGAAAGACAACAAAAGTTCTCAGCTTCCAATTGTTGTTAGGGGTGAGACTGACCATGTTCTGGAAAGTGAAGATGATGATGATGTGGATAGTGAAGATGAAGATGGTTTTCCAATTTCCACTACAGCGAAATCTAAATCTGAGTCTCAGAAGGTGGAAGCAGAAATGAAAGGGGAACAGACACGTAAAAAAACTGAGAAAGCTAACAAGAAGGCAAAAGGTGTTGATCATTCTGCTAGTTTAAAACGAAAAGTTCAAAGTGCTGATGAAGATGAGCAACTGCAAGATGGGAAAAAGAAGAAGAATAAGTTGAAAGAACATGGTAAAGGGGAAAGTGCTCATGCATCTGGCAATAGTAATGAGACTAATTTTACTATGCCAGATGAAAAGCATCCCAAGGTGGTTAAAGCTACACCCAACCCGAACAATGTTTCTCATGCAAAGGATGGGCATGATGGAAAGTTATCCAACAACGAGGACCTTGCTGAGAAGAAAAACAAGAAGAAAAAGAAGAAAAAGACCAACGAGTCTGTAGAGGTAGCTACTGTAAATGAAATTGATCCAACTGTTGAAAATCAGAATTTGTCCACCTCAGAGAGAAAAGGGAAGAAACAAACTGAAGCTAAGCCATCTCAAGTGAGAACCTTTCCAAATGGGTTGGTTATAGAGGAGCTATTTATGGGTAAACCAGATGGCAAAAGAGCCACTCTCGGAAAGAAGGTCAGTGTTAAATATATTGGGAAGCTGCAAAAAGATGGGAAAATATTTGACTCAAACGTGGGAAGAGCACCCTTTAAATTTCGCCTTGGTGTAGGACAAGTCATCAAGGGGTGGGAGGTTGGGGTCAATGGGATGAGGATTGGCGACAAAAGAAGAATCACAGTTCCACCATCGATGGGATACGCAGACAAACGTGTTGGGAGTATACCACCAAATTCGTGGCTTGTATTTGATGTCGAGTTAGTTGGTGTTGATCGCTGA 1542 0.4086 MGFWGIEVKPGKPYPYHADNVQGKLHVTQATLGIGSSTEKSILQCSSGHKSPVFLCSLLPNMSESCPLNLEFDDDDLVAFSVIGSRSIHLSGYFVADDGDDLRDDYEYDSLGEDIVGTETEESSEYDSEDDEYDDDFFNDDDINLYQSSPVQNRGVVIEEIVEDDKPENGDDSTKKLMKKKQVAPSKEKDNKSSQLPIVVRGETDHVLESEDDDDVDSEDEDGFPISTTAKSKSESQKVEAEMKGEQTRKKTEKANKKAKGVDHSASLKRKVQSADEDEQLQDGKKKKNKLKEHGKGESAHASGNSNETNFTMPDEKHPKVVKATPNPNNVSHAKDGHDGKLSNNEDLAEKKNKKKKKKKTNESVEVATVNEIDPTVENQNLSTSERKGKKQTEAKPSQVRTFPNGLVIEELFMGKPDGKRATLGKKVSVKYIGKLQKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGVNGMRIGDKRRITVPPSMGYADKRVGSIPPNSWLVFDVELVGVDR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2635g00004 513 Gene3D Nucleoplasmin core domain 1 100 - -
Gabi2635g00004 513 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 512 - -
Gabi2635g00004 513 MobiDBLite consensus disorder prediction 334 352 - -
Gabi2635g00004 513 MobiDBLite consensus disorder prediction 110 132 - -
Gabi2635g00004 513 MobiDBLite consensus disorder prediction 162 188 - -
Gabi2635g00004 513 Gene3D - 374 513 IPR046357 GO:0003755
Gabi2635g00004 513 PIRSF FK506-bp_FPR3 312 512 IPR023566 GO:0003755
Gabi2635g00004 513 PIRSF FK506-bp_FPR3 1 53 IPR023566 GO:0003755
Gabi2635g00004 513 PIRSF FK506-bp_FPR3 198 337 IPR023566 GO:0003755
Gabi2635g00004 513 PIRSF FK506-bp_FPR3 50 197 IPR023566 GO:0003755
Gabi2635g00004 513 FunFam Peptidyl-prolyl cis-trans isomerase 400 513 - -
Gabi2635g00004 513 MobiDBLite consensus disorder prediction 235 299 - -
Gabi2635g00004 513 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Gabi2635g00004 513 SUPERFAMILY FKBP-like 394 511 - -
Gabi2635g00004 513 MobiDBLite consensus disorder prediction 366 383 - -
Gabi2635g00004 513 MobiDBLite consensus disorder prediction 208 222 - -
Gabi2635g00004 513 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 425 512 IPR001179 GO:0003755
Gabi2635g00004 513 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 420 509 IPR001179 GO:0003755
Gabi2635g00004 513 Coils Coil 348 368 - -
Gabi2635g00004 513 MobiDBLite consensus disorder prediction 162 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2635g00004 Gabi-Chr2635 41026 45743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2635g00004 425 510 Calmodulin-binding Proteins AT5G48570 47.778 7.91e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2635g00004 K14826 - gmx:100792856 722.62