Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2633g00003 ATGGCAGAATCACGGTCTCCTAAGCGCCTCAAAATTACAAGGGGGGAAGATGATTATATGCCCGGAAACATTCTTGAGATTGAGCTTCGTAATTTCATGACTTTTGATTACTTAAAATGCAAACCTGGGCCTCGATTGAATCTTGTAATTGGGCCCAATGGTTCTGGGAAGAGTTCTCTCGTGTGCGCTATTGCTCTTGGTCTCTGTGGAGAGCCCCAGTTGCTTGGGCGAGCCACGAGTATTGGGGCATATGTGAAGCGGGGAGAAGAGTCTGGCTACATTAAGATTACGCTGAGAGGGAACCATAAAGAAGAACACATTACCATTATGCGAAAAATAAACACTAACAATAAGTCTGAATGGTTGTTCAATGGAAATATAGTGGCCAAAAAGGACGTGGCTGAAACCATTCAAAGGTTTAATATCCAAGTCAATAATTTGACTCAGTTCTTACCACAAGATAGGGTCTGTGAGTTTGCGAAGTTAACTCCTGTGCAACTTCTGGAAGAGACTGAAAAGGCTGTTGGTGATCCACAACTTCCAGAGCAACATTGTGCATTAGTTGATAAAAGTCGTGCATTGAAGCATATTGAGCTGTCTCTGGAGAAAAATGAAGGAACTTTAAATCAGTTGAAGGAACGGAACGCTGAATTAGAGAAGGATGTTGAACGTGTCCGTCAAAGAGATGAACTTCTTGCCAAGGCTGCATCAATGAAAAAGAAATTGCCTTGGCTGAGGTATGATATGAAGCAGGCAGAATACCGGGAAGCTAAGGAGCGTGAGAACAATGCAGCAAAGGCATTGGAGGAAGCTGCAAAGTTATTAAATGATCTGAAAGAACCTATTATGAAACAAAAAGGGGAGAAGGCTGCATTAGATGCAAAATGTAAAAAGGTTAGCAGCTGCATAAATGAGAATGCTAAGAAGCGAATGGAACTTATGGAGAAAGAGAATCGATTGGATGTGGAATTACGTGGAAAGTACAAAGATATGGAAGAGTTAAGGAGGCACGAAGAAACTCGGCAACAAAGACTTAGAAAAGCTAGGGAGGAACTTGCTGCTGCTGAACTTGAACTTGAGAATCTACCTCCTTATGAACCTCCTAAGGAAGAGCTTCAAAGACTAAAAGCTGAAATATTGGAGTTGGATAATTCTGCTAGTCAAGTGAGACAGAATAAATCACAGACAGAAAATGAGATAAAGCGTAGAAAGTCATCCCTGATGCAGTGTCAAGAGAGGTTGAAGGAAATGAATAATAAATATACCAAGTGTTTGCATATATTGCAAAGATCTGGGGCGGATAAAATTTTTGAAGCTTATAATTGGGTCCAAGAGCATAGCCATGAATTCAAGAAGGAGGTTTATGGCCCAGTTTTAGTTGAGGTGAATGTCTCAAATCGGGTTCATGCTGCATATCTAGAGGGTCAAGTTGCTCATTACATTTGGAAGATATTGGAGAATTCTGTCCACAGCTTGCAAGTGTTTATCCCTCGGATCATGCATAAATCATAG 1512 0.4107 MAESRSPKRLKITRGEDDYMPGNILEIELRNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGNHKEEHITIMRKINTNNKSEWLFNGNIVAKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHCALVDKSRALKHIELSLEKNEGTLNQLKERNAELEKDVERVRQRDELLAKAASMKKKLPWLRYDMKQAEYREAKERENNAAKALEEAAKLLNDLKEPIMKQKGEKAALDAKCKKVSSCINENAKKRMELMEKENRLDVELRGKYKDMEELRRHEETRQQRLRKAREELAAAELELENLPPYEPPKEELQRLKAEILELDNSASQVRQNKSQTENEIKRRKSSLMQCQERLKEMNNKYTKCLHILQRSGADKIFEAYNWVQEHSHEFKKEVYGPVLVEVNVSNRVHAAYLEGQVAHYIWKILENSVHSLQVFIPRIMHKS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2633g00003 503 Coils Coil 372 420 - -
Gabi2633g00003 503 Coils Coil 194 235 - -
Gabi2633g00003 503 Coils Coil 331 358 - -
Gabi2633g00003 503 Gene3D - 23 231 IPR027417 -
Gabi2633g00003 503 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 483 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Gabi2633g00003 503 Coils Coil 250 278 - -
Gabi2633g00003 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 283 IPR027417 -
Gabi2633g00003 503 Pfam RecF/RecN/SMC N terminal domain 24 147 IPR003395 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2633g00003 1 483 Structural Maintenance of Chromosomes family AT5G15920 63.768 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2633g00003 K22803 - gmx:100778678 759.985