Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2621g00002 ATGAGCTCAAAGGATTTATGGGTGCTTCTTTGTTTCTCTATTGTGGGTTTGAGCTTGTTCTATGGGATGCAGTGCCAGGAAATTAGTGACTTGGACAACCCAGTTGTTCTGCAACTTGTTACCCAGATTGTGTATAATAGAATATCCAACTTGACCTCTCTTCTCAATCAACAAATCAAAACACGCTCCAGTTTCTGCGTCAAAGATCAGGATGCTGATTGGAATAAAGCATTTAATTTTTCTTCTGATTTGGGCTTCGTGACTTCTTGCATTCAGAAGATTAAAGGAGATATTACTCCCCGCTTGTGTACAGCAGCAGAAATACAGTTTTACTTAAATAGTTTATTTGAGAGACCTACAAGTGCCAACTATTTAAAGCCTAACAAGAACTGCAATTTATCCTCATGGGTCTCTGGTTGTGAGCCAGGATGGGCCTGTAGTGTTCCCTCAAGCCAGCAGGTTGACCTTAGAAATTCACAGGAGATACCTGCCAGAACTACAAACTGTCAAGCATGTTGTGAGGGTTTCTTCTGTCCTCATGGCATCACATGCATGATACCTTGCCCTCTAGGTTCCTATTGCCCTCTTGCTACACTCAATAATGCAACTGGTGTATGTGAACCATATTTTTATCAATTGCCTCCAATGCAGCCAAACCATACTTGTGGAGGAGCAAATATCTGGGCTGATGTTAGTAGCAGTAGTGAGATATTTTGTTCAGCAGGATCGTATTGCTCTACAACTACCAAAAGAATTCCTTGCAGTAGTGGGCATTACTGTAGGATGGGTTCTACGTCTGAGGAAAGATGCTTCAAGTTGAGCTCATGTAATTCAAACACTGTGACCCAAAATATGCACGCATATGGAATTATGCTCATGGCTGCTTTGAGTACTTTGCTCCTCATTATTTACAGCTGTTCTGACCAAGCTCTCACTACTAGAGAAAGGAGAATGGCAAAATCCAGAGAAGCAGCGGCCAGAAGTGTAAGGAAGACTGCAAATGCACGCCAAAGATGGAAAGCTGCAAAAGATGCTGCCAAGAAGGGTGCAAGTGGACTGCAAGCTCAACTATCACGAACATTTTCTCGTACAAAGGATGTGGCAGACTCAGAAGAAGTTAAAATTTTGAGTCAAGGAACTGCAGAAACAGATATTGAATTGTTTTCGCAATCACAACCTATTACTTCAAGCAAGATTTCAAGTTCATCTGCAGTTCCAAAGGAAAAGGGTAAAGTACACAGTGATCTGTTGCAGATGATACATGAAATTGAAAATGATCCAGATATCAGTGACAACTTTCATGAAGAAATAGAAACTAGATATAAAAATGTTATAGCGAAAGTGTCCAAGGAAAAACAACTGCATACGCATAGTCAAATTTTTAAGTATGCATATGCTCAACTGGAGAAAGAGAAGGTTCAGCAGCGAGAAAACAAGAACCTTACCTTCTCAGGAGTAATTAGTATGGCGACCAAAAGCGAACAAAGCAAACGGCCATTACTTGAAATTTCTTTCAAAGACCTAACTCTCACTTTGAAAGCACAAAAGAAACATATATTGAGATGTGTTACAGGGAAAATTAAACCTGGCCGCATCACTGCTGTCATGGGTCCATCAGGTGCTGGCAAGACCACATTTCTTTCAGCAATAGCCGGAAAGACATTTGGATGCAAAGTGACTGGTTCCATTCTTATAAATGGAAAGAATGAATCAATCCACTCCTATAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTGACAGTGGAAGAGAATTTCCGGTTCAATGCACAGTGCAGGCTATCTGCTGACTTGTCAAAACCAGACAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAGTCTGTACGAAATTCTTTGGTTGGAACTGTGGAAAAGCGTGGGATCTCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTCATGGAACCTTCACTTTTGATTTTGGATGAACCGACATCTGGTTTGGACAGTGCATCGTCTCAGCTCCTTCTTAGAGCACTAAGACGTGAAGCTCTTGAAGGAGTGAACATTTGCTTGGTGGTTCACCAACCCAGCTATTCTTTGTTTAAGATGTTTGATGACTTAATACTCCTGGCAAAGGGAGGTCTTACTGTATATCATGGATCAGTTAAGAAAGTTGAAGAATACTTTTCAGGCCTTGGGATAAATATCCCAGAGCGCATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCATAGCAGTATCTAGTGAAAGTTCAGGGATCAGTTATAAGGATCTGCCAGTTAGATGGATGCTTCATAATGGATACCCTGTACCTCTTGACATGTGGCAGAATATGTACTTAACTGTAGACCCTGCTAAAGAAATTGATGTAGAAAGAAGCTTTGCTGAAGAATTATGGCAAGATGTGAAAAACATTGTGGAACTAAAGGGGGAGAAAATAAGATTGAATTTTTTAAGATCCAAAGATTTATCCAGTCGGAAAACTGCTGGTATATTCAAGCAATACAAGTACTTCCTTATACGGGTTGGGAAGCAGCGACTAAGGGAAGCTAAGATTCAAGCCATAGATTATTTAATATTATTACTTGCTGGAGCGTGCTTAGGATCACTTACTAAAGCAAGTGATCAGACCTTTGGTGCAGCTGGATACACCTATACGGTGATTGCTGTATCTCTTTTGTGCAAAATAGCGGCCTTGAGATCATTTTCTCTGGATAAATTACACTATTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTTCTCTCTAAAGATACAATTGATCATTTTAATACAATGATCAAGCCTGTGGTGTACCTTTCTATGTTCTACTTTTTTACCTATCCAAGATCAACTTTTGCAGATAATTACATTGTGCTGCTTTGTCTTGTATACTGTGTGACTGGTATAGCATATGCATTGGCCATATTCTTTGAACCCGGCGCAGCTCAGCTATGGTCAGTACTTCTTCCAGTTGTTTTGACACTTGTTGCAACACAACCAAAAGATAGTAAATTTTTGAAGGTCATAGCTGATTTATGCTATTCTAAGTGGGCTTTAGAAGCATTTGTAATTGCAAATGCTGAAAGGTATCATGGAGTGTGGCTCATAACTCGTTGTGGTTCACTACTGAAAAGTGGCTATAATCTTCATGATTGGAGTTTATGCATATTCATCCTCATTCTTATGGGTGTAATTGCTCGTGTACTAGCATTTTTCTGTATGGTTACCTTTCAAAAAAAGTAA 3300 0.3997 MSSKDLWVLLCFSIVGLSLFYGMQCQEISDLDNPVVLQLVTQIVYNRISNLTSLLNQQIKTRSSFCVKDQDADWNKAFNFSSDLGFVTSCIQKIKGDITPRLCTAAEIQFYLNSLFERPTSANYLKPNKNCNLSSWVSGCEPGWACSVPSSQQVDLRNSQEIPARTTNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNNATGVCEPYFYQLPPMQPNHTCGGANIWADVSSSSEIFCSAGSYCSTTTKRIPCSSGHYCRMGSTSEERCFKLSSCNSNTVTQNMHAYGIMLMAALSTLLLIIYSCSDQALTTRERRMAKSREAAARSVRKTANARQRWKAAKDAAKKGASGLQAQLSRTFSRTKDVADSEEVKILSQGTAETDIELFSQSQPITSSKISSSSAVPKEKGKVHSDLLQMIHEIENDPDISDNFHEEIETRYKNVIAKVSKEKQLHTHSQIFKYAYAQLEKEKVQQRENKNLTFSGVISMATKSEQSKRPLLEISFKDLTLTLKAQKKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSAIAGKTFGCKVTGSILINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENFRFNAQCRLSADLSKPDKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICLVVHQPSYSLFKMFDDLILLAKGGLTVYHGSVKKVEEYFSGLGINIPERINPPDYFIDILEGIAVSSESSGISYKDLPVRWMLHNGYPVPLDMWQNMYLTVDPAKEIDVERSFAEELWQDVKNIVELKGEKIRLNFLRSKDLSSRKTAGIFKQYKYFLIRVGKQRLREAKIQAIDYLILLLAGACLGSLTKASDQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTMIKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYALAIFFEPGAAQLWSVLLPVVLTLVATQPKDSKFLKVIADLCYSKWALEAFVIANAERYHGVWLITRCGSLLKSGYNLHDWSLCIFILILMGVIARVLAFFCMVTFQKK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2621g00002 1099 Pfam ABC transporter 522 672 IPR003439 GO:0005524
Gabi2621g00002 1099 ProSitePatterns ABC transporters family signature. 644 658 IPR017871 GO:0005524|GO:0016887
Gabi2621g00002 1099 Pfam ABC-2 type transporter 701 1099 IPR043926 GO:0140359
Gabi2621g00002 1099 CDD ABCG_EPDR 501 727 - -
Gabi2621g00002 1099 Gene3D - 488 739 IPR027417 -
Gabi2621g00002 1099 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 241 1087 - -
Gabi2621g00002 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 736 IPR027417 -
Gabi2621g00002 1099 FunFam ABC transporter G family member 24 497 739 - -
Gabi2621g00002 1099 SMART AAA_5 529 721 IPR003593 GO:0016887
Gabi2621g00002 1099 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 744 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2621g00002 Gabi-Chr2621 52544 100570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2621g00002 527 733 Calmodulin-binding Proteins AT2G36910 27.434 3.76e-11 65.9