Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2617g00003 ATGGCCAACCAAACTCAAACACAGTCTCACCCTAACACTAGCATCGATCCAAACAGCGGTTTCTGCTCTCATTCCAGAACCTTCCACAGCCTCCGTCCAAACGTCCCACTCCCTCCACCCTCTCAACCGCTCTCCCTAACCGACTACGTCCTCTCTCTCATCCCCACCGCCGCCGCCACCACCACCGTTCTCATTGACTCCGCCACCGACCGCCACCTCTCCTACTCCCTATTCATCCGCCAAGTCAAATCCCTCGCCTCCTCCCTACAATCCCTTACCCCTCTCTCCAAGGGCCACGTGGCATTCATCCTCACCCCTACTTCCCTACACGTGCCCGTACTCTACTTTTCCCTACTCTCCCTTGGCGTCACAATCTCACCCGCTAACCCGCTCAGTTCTCCCACCGAGTTGACTCACCAGGTTCGACTCACCAAACCCGCTATCGCCTTCGCCACGTCATCCACCGCGCCCAACATTCCCTCCCTCCAATTCGGGACCATCCTCCTCGACTCGCCCCAGTTCCTTTCCATGCTCGATGGTGAATCGCAGCCTCGCCGAGTTGAAGTGAGTCAGTCTGACTCGGCGGCGATTCTCTTCTCTTCCGGCACCACCGGGCGAGTGAAGGGCGTGTTGCTCACTCACGGGAACTTCATCGCGCTGATTGGAGGATTTTTCCACCTGAAGCACTTGGTGGAGACAGATGAACCGCAATCGGTGTCGCTGTTCACGCTCCCCCTTTTCCACGTGTTTGGGTTCTTCATGCTGTTTAGGGCCATAGCCATGGGGGAGACCTTGGTGTTGATGCAGAGGTTCGATTTTGAAGTGATGTTGAAGGCCGTCGAGAGGTACAGGATCAGCTACATGCCGGTGTCGCCGCCACTCGTGGTGGCGCTCGCTAAGTCTGAGTTAGTGAACAAGTATGACCTTAGCTCGCTCCGGTTGTTGGGGAGCGGTGGCGCGCCGCTCGGTAAGGAGGTGGCGGAGAACTTCAATGCCAAATTCCCTAACGTTGAAATTGTGCAGGGCTATGGTCTGACAGAAAGTGGAGGAGGAGCAGCGAGAATGGTAGGGCCTGATGAGGCTAAGCGCCATGGTTCTGTGGGTCGACTAGCAGAAAATATGGAGGCCAAGATAGTGGACCCTGTTACTGGAGAGGCGTTATCAACTGGCCACAAAGGAGAGCTATGGTTGAGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGACAAGGCGACTGTTGAAACATTGGATTCAGAGGGATGGTTGAAGACTGGCGATCTTTGTTATTTTGACTCTGATGGTTTCCTCTTCATTGTAGATAGACTCAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCAGCTGAATTGGAACATATACTTCACACCAATCCTGAGATTGCTGATGCTGCAGTAATTCCGTATCCTGATGAAGATGCAGGACAGATTCCAATGGCCTTTGTAGTACGAAAGCCTGGAAGCAACATCACTGCAGCTCAGGTCATGGAGTTTGTAGCAAAGCAGGTTGCACCGTACAAGAAGATTCGACGTGTTTCGTTTATTAACTCTATCCCAAAGTCTCCAGCTGGTAAAATTTTGAGAAGAGAATTAGTTGGTGTTGCTCTATCTAGTGGTTCATCCAAATTGTGA 1656 0.5229 MANQTQTQSHPNTSIDPNSGFCSHSRTFHSLRPNVPLPPPSQPLSLTDYVLSLIPTAAATTTVLIDSATDRHLSYSLFIRQVKSLASSLQSLTPLSKGHVAFILTPTSLHVPVLYFSLLSLGVTISPANPLSSPTELTHQVRLTKPAIAFATSSTAPNIPSLQFGTILLDSPQFLSMLDGESQPRRVEVSQSDSAAILFSSGTTGRVKGVLLTHGNFIALIGGFFHLKHLVETDEPQSVSLFTLPLFHVFGFFMLFRAIAMGETLVLMQRFDFEVMLKAVERYRISYMPVSPPLVVALAKSELVNKYDLSSLRLLGSGGAPLGKEVAENFNAKFPNVEIVQGYGLTESGGGAARMVGPDEAKRHGSVGRLAENMEAKIVDPVTGEALSTGHKGELWLRGPTIMKGYVGDDKATVETLDSEGWLKTGDLCYFDSDGFLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVIPYPDEDAGQIPMAFVVRKPGSNITAAQVMEFVAKQVAPYKKIRRVSFINSIPKSPAGKILRRELVGVALSSGSSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2617g00003 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Gabi2617g00003 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 540 - -
Gabi2617g00003 551 CDD 4CL 61 539 - -
Gabi2617g00003 551 Gene3D - 445 544 IPR045851 -
Gabi2617g00003 551 Gene3D - 28 444 IPR042099 -
Gabi2617g00003 551 Pfam AMP-binding enzyme 61 449 IPR000873 -
Gabi2617g00003 551 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Gabi2617g00003 551 SUPERFAMILY Acetyl-CoA synthetase-like 61 543 - -
Gabi2617g00003 551 FunFam 4-coumarate--CoA ligase 2 445 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2617g00003 Gabi-Chr2617 91923 100247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2617g00003 7 551 Monolignol Biosynthesis Gene Families AT5G63380 60.250 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2617g00003 K01904 - gmx:100777435 901.353