Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2614g00013 ATGGAAAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACTTTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGCGAAGTTGTTGCGATCAAGAAAATGAAGAAAAAATATTATTCTTGGGAGGAGTGTGTAAACCTTAGAGAGGTCAAGTCATTACGAAAAATGAACCACCCAAATATTGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTAATGAAAGACAGGGAAAAACTGTTTTCTGAAGGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTCGCATACATGCACCAGCGTGGATACTTCCATCGTGACCTAAAGCCTGAAAACTTGCTGGTTACCAAGGATATCATCAAAATTGCTGATTTTGGCCTAGCCCGAGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCGTATCTGTATAGCTCTAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGCTCACTCTCCGTCCTCTTTTTCCTGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGTGGTGTGATTGGTAATCCAACCACTGAATCATGGGCTGATGGGCTCAAACTTGCAAGGGAAATCAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTTTCTGTATTGATCCCAGCTGCAAGTGATGATGCAATCAACCTTATCACTTCACTTTGTTCATGGGATCCATGCAAGAGGCCAACAGCTTCAGAGGCCCTTCAACATCCTTTTTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGAACCAGAGCAGTAGCAAGAACTCCACCTGGTTTGTTATATTTATATATTTTGTTAGCTGCGGATATGCTTGTTGTACATTTGTACAGGATCTTAATTGTCGCCCTTTTCTCAGCTGGAGCCAGGGGAGCACTGGATCAGCAAGGGGTCAAGAGATATTCTGGTGCTTTGCCTAATTCAAAGCTCACAAATAATTTTTCTTCCCCAAAACTACATCCTCCTTTGGTTTCAGGGGTGCAACGGAAGCTGGATATGGTAAATCTGAATGGAATTAAGAACGAAAAATCAATAAAGACTATTAAACAATCAAAATATCGACAGCCAGGAAAGGACAGCCCAACTTCTCTAAATAAGGGGAGGACTGGACGTGGGGTTTCAGAAACAGCCGAGAGGTTGGCCAATATGTCTGTTGGTACTCGAAGACAATCGATGGGACAAGCCCGTCCTCCTCCAATGAAGGCTGGAGTCAATTGGATTTCTGAATCTGGAAACTACATGCTCAGGACAGCACAACAGATTCCGACTGGAAGAACTTTCCCAAGAAAAGTGGCCGGATGA 1437 0.4315 MERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELLTLRPLFPGASEADEIYKICGVIGNPTTESWADGLKLAREINYQFPQLAGVHLSVLIPAASDDAINLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVARTPPGLLYLYILLAADMLVVHLYRILIVALFSAGARGALDQQGVKRYSGALPNSKLTNNFSSPKLHPPLVSGVQRKLDMVNLNGIKNEKSIKTIKQSKYRQPGKDSPTSLNKGRTGRGVSETAERLANMSVGTRRQSMGQARPPPMKAGVNWISESGNYMLRTAQQIPTGRTFPRKVAG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2614g00013 478 MobiDBLite consensus disorder prediction 399 415 - -
Gabi2614g00013 478 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Gabi2614g00013 478 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2614g00013 478 MobiDBLite consensus disorder prediction 395 419 - -
Gabi2614g00013 478 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 352 - -
Gabi2614g00013 478 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2614g00013 478 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Gabi2614g00013 478 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Gabi2614g00013 478 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Gabi2614g00013 478 CDD STKc_MAK_like 4 283 - -
Gabi2614g00013 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Gabi2614g00013 478 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Gabi2614g00013 478 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2614g00013 478 Gene3D Transferase(Phosphotransferase) domain 1 84 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2614g00013 Gabi-Chr2614 85564 92246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2614g00013 1 286 Core Cell Cycle Gene Families AT1G66750 38.488 1.23e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gabi2614g00013 Pkinase 4.5e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2614g00013 K08829 - gmx:100810150 818.15