Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2614g00010 ATGGTTGATGCGTTGCTTAATACAGTGATTGATAGCATAAAATCTTTGGCACAGGATCAGCTTGCAACGTTTTTGGGTGTTCATCAACATACCCGAAAGCTAACTGGACATCTCACTGCAATCCATGCTGTACTCCAAGATGCTGAGGAAATGAGAATGACAAGCCATGGCCATGCCGTTAAGGTTTGGCTGCAGAAGCTCACTGATGCTGCTCATGTTCTCGACGACATATTGGACCATTGTTCAATCCAGTCCAACAGACAAAATTCACACACAACGTGCTTAACCCCTTTCCATCCTAACAACGTTCTGTTTCGTTGGCATGTTGGTAAGAGGATGAAAGATATCACCCAAAGATTTCATGATATTGATGAAGAAAGGCGCTTGTTTGAATTTCGTGCTGGGAGAGTTGTGGGGACCCAAAGCCAACCTCAAGTTGAAGAATGGCGTCAAACTAGCTCTGCCTTCACTGAACCCAAATTATATGGAAGAGACAAAGACGCAGAGCAGATTGTGGAGTTTCTTCTCAGCCATACCACCAACAACACTGAAGGCCTCTCAATCTATCCCATTGTTGGTTTGGGTGGACTTGGAAAAACAACTCTTGTACAACAGGTCTTCAATGATGAAAGGGTAACCACACATTTTGACTTGAAAATATGGGTTTGTATTTCTGATGATTTCAGTATCAACAGAATTATGCTATCTATCATAGAATCTATCACCGGAAAAAACCCCAACCTCTTGACTTTAGAAGCACTGCAAAAAGAAGTTCGAGAACTGTTGCAGAGCAAAAGATATTTACTTGTTTTGGACGATGTGTGGAATGAAGACCAAGACAAATGGAACAAGTTGAAGGAGTATATGTTGCAGTGTGCAAGGGGAGCAAAAGGTGCTTCAATTTTGGTCACTACTCGACTTGAGAATGTTGCCAACATCGTGAGAACAGTCTCTGTTCATTACTTGTCATCTTTATCAGAGGATGACAATTGGTCATTGTTCCAACATCATGCATTTGGACCAGATAAGGAAGGGCCTGCAGAGCTTGTATCAATAGGCAAGGAAATTGCGAAAAAATGTGCCGGTTTGCCTCTTGCAGCCAAAGCACTGGGAGGCCTTTTGCATTTTAAAAGTCAGAAAAGTCAATGGCTTAGTGTAAAGGAGAAAATACCCCATGATAATATCATCATGGCTGTTTTGCAACTGAGCTACTTTAATTTGAAGTTATCATTGAGGAGATGCTTTTCTTTTTGTGCCATCTTCCCCAAAGATAAAAAAATCTCGAAGGAAGATCTAATTCATCTCTGGATGGCAAATGGATTTATTTCATCGAGAGGAAGTTTGGAGGTGGAGGATGTTGGTTATGAGGCGTGGAATGAATTGTACCAGAGATCATTTTTCCAAGATGTCCAGATTGATGCATTCAGTCAAATTACAAGTTTCAAGATGCATGATCTCGTTCATGATCTTGCCCAGTCTATTATGGGTGAGGAATGTGTGGTTTGTGAGCCTGCAATGTTGACCAAATTGTCAAGTAGAGTCCACCATATAAGTTGCTTAAAATCTGATGATGATAAGCATCCACGATTCAAGTTGAACATGGGTGCCTTCAAGAAATTTGAATCATTGCGGACTTTTCTTCAGTCTAAATATCCATCATCGCCAAATGCCTGGGTGTTGCCATCAGTCCATTCTCTCCGAGCATTATCTACAAGCTCTTCTCAACTCTCGGCACTCAAGAATTTAATACATTTAAGGTATTTGAACATTCATCGCAGTGCCATCTCAACGTTGCCTAATTCTATTTGCGAATTACAGAAATTGCAAATATTGAAACTGAAAAATTGCCGAAAGCTTTCTTGTTTGTCCAAAGACTTGACACGATTACAAGAACTCAGACATCTTGTGATTGAAGGCTGTGATTCATTAGTAGCGATGCCTCCCAATATGGGGAAGTTAAGCTGTCTGAGAACATTGAGCACTTTCATTGTGGGTTCGAAGGTAGGGTTTGGCTTAGATGAGTTACATGGCTTACAACTGGGAGGCGAGCTACATATCAGAGGTCTTGAGAATGTCTCCAATGAATGGGATGCTAAAGAAGCCATTTTGATTGATAAAAATGACCTAAATCACTTATCTTTGCAATGGGGTAGCAATAATGCTAATTCAGAGGGTACCATTAATGCTGAGCACGAGAGAGTACTTGAAGCCCTTCAGCCTCCCTCAAATCTCAAGAGTTTTAAGATGAGGGCATACATGGGGGCACAACTGCCCAGTTGGATGAGAAATACCTCATTTCTCGAAGGCTTGGTTGATGTTACACTCTTCGACTGCAACAACTGTCAGCGGCTTCCTCCATTTGGTAAATTCCCGCATTTAAAATCTCTTTACCTATATGGAATGAAAGATTTGAAATACATAGATGATGACTCGTACAATGTTGTGGAGGAGAAGGCTTTTCCATCCTTAAACATACTGAGTTTGTCGAATTTACCAAATGTGGAGAGCCTGATGAGAGATGAAGGAGTAGAGATGTTCCCACGTCTTTCCAAATTGAGAATTTCGGAAGTCCCCAACCTTAAATTGCCATGCATTCCTTCTGTTGAGTCCCTTTACTATGGTTCCCTTGCAGACGCGACTTCCTTCCCAGAAGGGATTTTGAGGAATTTGCGTAGTCTTAATACACTGCGTATTAAGGGTTTATACAAACTCAAGGCATTGCCCGACGAACTCGGCAGCCTCAGTGCATTACAACAACTAGACATTTCTTACTGTCCTGAACTTGAGTGTTTTCCAGAGCATGTGTTGCAAGGTCTGACTTCTCTTCGATCTCTGCATATTTGGTTTTGTGAAAAATTGAAATCTTTGTCTGAAGGAGTGGGACACCTAACTTGTCTTGAGAGCCTCGAAATCTTGCGATGTCCAGAGCTGGTGAGTCTACCCAGCAATATGAACCAGCTAATTGCTCTTCGTCGCGTGATGATCAAGGGCAGCACATTACCAGAAGGCTTAGAACGTATCCCCTCCCTACAAAGTTTGTATGTACGGGGAGATCATGGGCTAGTTTCGTTGCCTGACTGGTTGGGAGACATTACTTCTCTTCAAGAACTAGTAATCGTTGGATGTACGGAGTTGAGGTCACTACCAAATAGCTTTCAACACCTCACCAACTTGCATACATTATATATTGAGGGTAGCCCTAACCTGGAGAAGAGGTGCGAGAGGGGAACAGGGGAAGATTGGCAAAACATAGCCACGTCCCACAAATCGAATTCGAAGGACGTCCATCTTCAGAAGATAGCTCATGTTGTGGTAACTTCATTTTTGTAG 3330 0.4201 MVDALLNTVIDSIKSLAQDQLATFLGVHQHTRKLTGHLTAIHAVLQDAEEMRMTSHGHAVKVWLQKLTDAAHVLDDILDHCSIQSNRQNSHTTCLTPFHPNNVLFRWHVGKRMKDITQRFHDIDEERRLFEFRAGRVVGTQSQPQVEEWRQTSSAFTEPKLYGRDKDAEQIVEFLLSHTTNNTEGLSIYPIVGLGGLGKTTLVQQVFNDERVTTHFDLKIWVCISDDFSINRIMLSIIESITGKNPNLLTLEALQKEVRELLQSKRYLLVLDDVWNEDQDKWNKLKEYMLQCARGAKGASILVTTRLENVANIVRTVSVHYLSSLSEDDNWSLFQHHAFGPDKEGPAELVSIGKEIAKKCAGLPLAAKALGGLLHFKSQKSQWLSVKEKIPHDNIIMAVLQLSYFNLKLSLRRCFSFCAIFPKDKKISKEDLIHLWMANGFISSRGSLEVEDVGYEAWNELYQRSFFQDVQIDAFSQITSFKMHDLVHDLAQSIMGEECVVCEPAMLTKLSSRVHHISCLKSDDDKHPRFKLNMGAFKKFESLRTFLQSKYPSSPNAWVLPSVHSLRALSTSSSQLSALKNLIHLRYLNIHRSAISTLPNSICELQKLQILKLKNCRKLSCLSKDLTRLQELRHLVIEGCDSLVAMPPNMGKLSCLRTLSTFIVGSKVGFGLDELHGLQLGGELHIRGLENVSNEWDAKEAILIDKNDLNHLSLQWGSNNANSEGTINAEHERVLEALQPPSNLKSFKMRAYMGAQLPSWMRNTSFLEGLVDVTLFDCNNCQRLPPFGKFPHLKSLYLYGMKDLKYIDDDSYNVVEEKAFPSLNILSLSNLPNVESLMRDEGVEMFPRLSKLRISEVPNLKLPCIPSVESLYYGSLADATSFPEGILRNLRSLNTLRIKGLYKLKALPDELGSLSALQQLDISYCPELECFPEHVLQGLTSLRSLHIWFCEKLKSLSEGVGHLTCLESLEILRCPELVSLPSNMNQLIALRRVMIKGSTLPEGLERIPSLQSLYVRGDHGLVSLPDWLGDITSLQELVIVGCTELRSLPNSFQHLTNLHTLYIEGSPNLEKRCERGTGEDWQNIATSHKSNSKDVHLQKIAHVVVTSFL 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2614g00010 1109 Gene3D - 6 127 - -
Gabi2614g00010 1109 Gene3D - 404 494 IPR036388 -
Gabi2614g00010 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 418 IPR027417 -
Gabi2614g00010 1109 SUPERFAMILY L domain-like 482 863 - -
Gabi2614g00010 1109 FunFam Probable disease resistance protein At1g61300 143 317 - -
Gabi2614g00010 1109 Gene3D - 144 319 IPR027417 -
Gabi2614g00010 1109 FunFam Probable disease resistance protein At1g63360 404 493 - -
Gabi2614g00010 1109 Pfam NB-ARC domain 166 396 IPR002182 GO:0043531
Gabi2614g00010 1109 Pfam Rx N-terminal domain 6 92 IPR041118 -
Gabi2614g00010 1109 PANTHER DISEASE RESISTANCE PROTEIN RP 33 837 IPR044974 GO:0006952
Gabi2614g00010 1109 Gene3D Ribonuclease Inhibitor 530 858 IPR032675 -
Gabi2614g00010 1109 PRINTS Disease resistance protein signature 188 203 - -
Gabi2614g00010 1109 PRINTS Disease resistance protein signature 360 374 - -
Gabi2614g00010 1109 PRINTS Disease resistance protein signature 261 275 - -
Gabi2614g00010 1109 PRINTS Disease resistance protein signature 912 928 - -
Gabi2614g00010 1109 Gene3D Ribonuclease Inhibitor 862 992 IPR032675 -
Gabi2614g00010 1109 Gene3D Ribonuclease Inhibitor 993 1075 IPR032675 -
Gabi2614g00010 1109 Gene3D - 324 403 IPR042197 -
Gabi2614g00010 1109 SUPERFAMILY RNI-like 857 1070 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2614g00010 Gabi-Chr2614 65882 69211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2614g00010 191 660 WRKY Transcription Factor Family AT5G45050 23.092 3.22e-07 52.8