Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2606g00005 | ATGGGTTCAAGTCGCTCAGATGGCTCTGCCACTGGCAAAGAACGTTTACGTTGGTCACAAGAACTCCATGATCGCTTTGTGGAGGCTGTAAATAGGCTTGGTGGTCCTGATAGGGCAACACCAAAAAGTATATTAAAGGGGATGAAAGCAATGGGTGTTTCAGAATTGAATATTTATCATGTCAAAAGCCACTTGCAGAAATACAGGATCTCCAAATTGATTCCAGAGTCCACCACAAGAGGAAAGCTTGAGAGGAGAAGCATATCAGATATACTTCCGAATTTTAGTTCTATATCTGCTCTTCAGCTAAAGGAAGTTCTTCAAATGCAGAAGGAGGTGCAAAAAAGCTTGAGTGATCAAGTAGAGGTTGAGAGAAGCATGAAGGAAAAAATTGAAGCACAAGGAAATTACCTGGATAGAATTGGACAAAGTTACCATTGCAGAACAATCATTGGAAAAGGTTGCAAACCTTTTGTTGCTGCAGCTACACCTCTACCTTCTCTTTCTGAAGAATATGAATCTTTGGAAGCACAACATGAGGAAGAACATCAATCAACCAAAAAACAAAGGATCACAGAGGAGGGTGTTTTTCCAAGAAATTTTGAACTAGTATCATCCACCACACCAGAATTCTACAATCAAACTTGGAATCTTTCTTGGAGTCAGCTTGCAGCAGAATGTCAATCACCTTTAGTGCCTGGCTTCTTATTATAA | 714 | 0.4006 | MGSSRSDGSATGKERLRWSQELHDRFVEAVNRLGGPDRATPKSILKGMKAMGVSELNIYHVKSHLQKYRISKLIPESTTRGKLERRSISDILPNFSSISALQLKEVLQMQKEVQKSLSDQVEVERSMKEKIEAQGNYLDRIGQSYHCRTIIGKGCKPFVAAATPLPSLSEEYESLEAQHEEEHQSTKKQRITEEGVFPRNFELVSSTTPEFYNQTWNLSWSQLAAECQSPLVPGFLL | 237 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2606g00005 | 237 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 11 | 185 | IPR044848 | GO:0003700 | |
Gabi2606g00005 | 237 | Gene3D | - | 12 | 73 | - | - | |
Gabi2606g00005 | 237 | Pfam | Myb-like DNA-binding domain | 16 | 69 | IPR001005 | - | |
Gabi2606g00005 | 237 | Coils | Coil | 165 | 189 | - | - | |
Gabi2606g00005 | 237 | FunFam | Two-component response regulator | 9 | 73 | - | - | |
Gabi2606g00005 | 237 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 13 | 71 | IPR006447 | GO:0003677 | |
Gabi2606g00005 | 237 | SUPERFAMILY | Homeodomain-like | 12 | 70 | IPR009057 | - | |
Gabi2606g00005 | 237 | Pfam | MYB-CC type transfactor, LHEQLE motif | 102 | 141 | IPR025756 | - | |
Gabi2606g00005 | 237 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 15 | 73 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2606g00005 | Gabi-Chr2606 | 53516 | 60087 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2606g00005 | 3 | 138 | G2-like Transcription Factor Family | AT4G28610 | 48.592 | 1.12e-34 | 126 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Gabi2606g00005 | Myb_DNA-binding | 3.1e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2606g00005 | - | - | psat:127127459 | 317.39 |