Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2604g00001 ATGGGGATGATTTTGAAGGCATGGGAGCGTTGCCGATCTTTAAAAGCTGGCAGTGGCAACAAGAGGTCACCATTGAAAACCACTTCAAAATCATTGTCCGAGAATTATGAGAAGGGTCAAATAGCACCTGTGGGTTGTTTCTCAGTATACGTTGGACCTCATAGACAAAGGTTTGTTGTCAAGACCGAGTTTGTTAATCACCCACTATTCAAGGCGCTGCTAGAAGAAGCAGAATTGGAATATGGGTTTAAAAGTGATGGCCCTATTTGGCTTCCCTGCAACGTTGATTTGTTCTACAAAGTGTTGGGTGAGATGGCTTGCGAAGATGATCATGTCATTACAAGGGCCAAGGGGCTTTCTTCTTTTGTTCTTCGCAGCCCAGCCCGCCTTTTTTGTTACATAAATAGAGATCATAGTGCATATAGCGTTGTGGATTCGGAAATGCTGAAAATAAACCAATTTCTATAG 468 0.4274 MGMILKAWERCRSLKAGSGNKRSPLKTTSKSLSENYEKGQIAPVGCFSVYVGPHRQRFVVKTEFVNHPLFKALLEEAELEYGFKSDGPIWLPCNVDLFYKVLGEMACEDDHVITRAKGLSSFVLRSPARLFCYINRDHSAYSVVDSEMLKINQFL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2604g00001 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 101 IPR003676 GO:0009733
Gabi2604g00001 155 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2604g00001 Gabi-Chr2604 22521 22988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2604g00001 33 121 Calmodulin-binding Proteins AT4G34750 38.202 4.33e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2604g00001 K14488 - gmx:100793967 167.933