Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2600g00004 ATGGACAACTTTTGGGAGAGAATAGTGACAATTGTTATGGTTTCCTCTGCCATCATAGTTCCCAGAGCTGTTAATGGATCAATTCCGGCATTGTTTGCATTTGGAGACTCAATCCTTGATACAGGAAATAACAACAACCTTGCATCATTAAGTAAGTGCAATTTTCCTCCATATGGAAGAGATTTCATTGGAGGAAGAGCTACAGGAAGATGGAGTGATGGAAAAGTTCCCTCAGATTTGATAGCGGCGGCTCTGGGAATCAAAGAAACGTTGCCAGCTTATCTGGACCCCAACTTACAGAGTCAAGACCTCCCAACTGGGGTAGGCTTTGCTTCAGGTGGCTCAGGGAATGATAATATAACTTCTGGCGTACAGGGAGTTTTATCAATGTCCGCCCAACTACAATTGTTCCAAGATTACATAAAAAAGTTGAGAGCAGTTGTTGGAGATCAAAATGCATCTTCCATCATATCCAACGGCTTGTATCTGATTTCAGCGGGCAACAATGACATTGCCTTTGCTTATTCTTCCACGGCAAGGAGATTGATGTTATTCCCTACATATGCTGATCTTGTAGTTACGTGGCATTCAAATTTTGTCAAGGAACTATATCAACTTGGAGCACGACGCGTGTGGGTTTTAAGTACATTGCCATTGGGATGCTTGCCTGGAGCTAGAAATTCATTAGGTGGACCCTTAAGGCTTTGTGTAGAAATTGTGAATCAACAAGCACAGATATACAATGCAAAATTAGCATCAGCGATGTCTACAATTAGAACCAGTCTTTCCAATTATGACCTTGAGTTCGTTGATGTCTACACTCCTCTGCTTAATATCATACGGAATCCAGTAGGAGCAGGGTTTATAAGCGCTGTGAACGGGTGTTGTGGGACTGGGACACTTGAAATGGGAAGTTCATGTAACGTACTCATTGGCTCTTGTCCAAATCCTTCAGCACATGTTTTCTGGGATGCTGGCCATCCAACTCAGAGAACATATGAGCTCATTGTCGCTTCTATATTACAAACACACAATGTTTCGAACTCTATTGCTGCTTCTCCTTTGAAGTTTGAGTAA 1077 0.4215 MDNFWERIVTIVMVSSAIIVPRAVNGSIPALFAFGDSILDTGNNNNLASLSKCNFPPYGRDFIGGRATGRWSDGKVPSDLIAAALGIKETLPAYLDPNLQSQDLPTGVGFASGGSGNDNITSGVQGVLSMSAQLQLFQDYIKKLRAVVGDQNASSIISNGLYLISAGNNDIAFAYSSTARRLMLFPTYADLVVTWHSNFVKELYQLGARRVWVLSTLPLGCLPGARNSLGGPLRLCVEIVNQQAQIYNAKLASAMSTIRTSLSNYDLEFVDVYTPLLNIIRNPVGAGFISAVNGCCGTGTLEMGSSCNVLIGSCPNPSAHVFWDAGHPTQRTYELIVASILQTHNVSNSIAASPLKFE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2600g00004 358 FunFam GDSL esterase/lipase APG 21 345 - -
Gabi2600g00004 358 Pfam GDSL-like Lipase/Acylhydrolase 31 337 IPR001087 GO:0016788
Gabi2600g00004 358 SUPERFAMILY SGNH hydrolase 121 342 - -
Gabi2600g00004 358 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 31 42 IPR008265 GO:0006629|GO:0016298
Gabi2600g00004 358 CDD SGNH_plant_lipase_like 29 342 IPR035669 -
Gabi2600g00004 358 Gene3D SGNH hydrolase 22 350 IPR036514 -
Gabi2600g00004 358 PANTHER GDSL ESTERASE/LIPASE EXL3 15 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2600g00004 Gabi-Chr2600 69197 71602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2600g00004 9 351 Pollen Coat Proteome AT1G75910 42.407 1.81e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2600g00004 - - aip:107646231 435.647