Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2600g00003 ATGGAGCATGTATGCTGGGAGAGATTAGTGACTGTTGTATTGGTTTTCTTTGCCACCAGATTTCCCAAGGCCGTTGATGGAGCAATTCCAGCGTTGTTTGCATTTGGAGACTCAATTCTTGATACGGGAAATAACAACAACCTTGCAACGTTAAGCAAGTGCAATTTTCCTCCTTATGGAAGGGATTTCTTTGGAGCCAGACCAACAGGAAGATGGAGTAATGGAAGAGTTCCCTCAGATTTGATAGCGGAGGCTCTGGGAATCAAACAAACGTTGCCAGCATATCTGAACCCGTTCCTAAGTAGTCAAGAACTTGCCACTGGGGTATGCTTTGCTTCAGGTGGCTCAGGGTTGGACACAATGACAACTACCTTACAGGTTGGAGTTCTATCAATGTCCGCCCAAATGCAATTGTTCAAAGATTACATAAGAAGGTTGAGATCACTTGTTGGATATCAGAGAGCAGCGTACATCATATCCAACGGTTTGTACCTGATTTCAGCGGGCAACAATGACATTGCTATTACTTATACTGTGTCGCCAAGGAGATTGATGTTATTCAATCTATATGCTGATCTTTTAGTTGGGTGGCATTCAAATTTCGTCAAGGAACTATATCAACTTGGAGCACGACACGTGTGGGTTCTAAGTACATTGCCATTGGGATGCTTGCCTGGAGCTAGAAATTCAGTGGGTGGACCCTTAAAGTTTTGTGTAGACATTGTGAATGGACAAGCACAGATATACAATGTAAAGTTAGCATCAGCGATGGCTTCCATCAGAACAAGGGTTCCCAATTTTGACCTTCAATTCGTTGATGTCTATACTCCTTTGCTTAATATCATACGGAATCCTTTAGCAGCAGGGTTTGTAAACGCTGCGACCGGGTGTTGTGGAACTGGGACACTTGAAATGGCAGAGTTATGTAACATATTCATTGGCTCTTGTCCAATTCCTTCAGCATATGTTTTCTGGGATGCTGGCCATCCAACTCAGAGAACATATCAACTCATTGTGGCTTCTATACTAAAAAGACACAGAGTTTCAGGATACAATGTTTCAGGATATAATGTTTCAAGCTCTTTTGATACTACTCCTTCAAAGTTTGGCTCACATTAA 1119 0.4227 MEHVCWERLVTVVLVFFATRFPKAVDGAIPALFAFGDSILDTGNNNNLATLSKCNFPPYGRDFFGARPTGRWSNGRVPSDLIAEALGIKQTLPAYLNPFLSSQELATGVCFASGGSGLDTMTTTLQVGVLSMSAQMQLFKDYIRRLRSLVGYQRAAYIISNGLYLISAGNNDIAITYTVSPRRLMLFNLYADLLVGWHSNFVKELYQLGARHVWVLSTLPLGCLPGARNSVGGPLKFCVDIVNGQAQIYNVKLASAMASIRTRVPNFDLQFVDVYTPLLNIIRNPLAAGFVNAATGCCGTGTLEMAELCNIFIGSCPIPSAYVFWDAGHPTQRTYQLIVASILKRHRVSGYNVSGYNVSSSFDTTPSKFGSH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2600g00003 372 Gene3D SGNH hydrolase 22 348 IPR036514 -
Gabi2600g00003 372 PANTHER GDSL ESTERASE/LIPASE EXL3 13 341 - -
Gabi2600g00003 372 FunFam GDSL esterase/lipase APG 22 347 - -
Gabi2600g00003 372 Pfam GDSL-like Lipase/Acylhydrolase 32 339 IPR001087 GO:0016788
Gabi2600g00003 372 SUPERFAMILY SGNH hydrolase 110 344 - -
Gabi2600g00003 372 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 32 43 IPR008265 GO:0006629|GO:0016298
Gabi2600g00003 372 CDD SGNH_plant_lipase_like 30 343 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2600g00003 Gabi-Chr2600 60467 62439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2600g00003 10 344 Pollen Coat Proteome AT1G75910 45.058 5.22e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2600g00003 - - mtr:11422775 427.557