Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2600g00001 ATGGCTCTTTTTATGAAGCTCCATTCTTCTCTTCCGAATTCAATTTGTACCTCAATGCTTCTCCGTTTGATGCTATTTTTAATTGTTTCCTGCAAAACGGAGGCTATTTTGAAAATTCCACCAAATGTTTTGTTTCCAGCTGTGTTGGTGTTTGGAGATTCGATAGTGGATACTGGCAACAACAACGAAAACATACAAACAGCAGCTCGGTGCAATTTTCTACCGTATGGGGTAGACTTTGAGGGAGGGATCCCAACTGGCCGATTTAGCAATGGAAAAGTTCCATCGGATCTTGTAGTTGAAGAATTGGGCATTAAAGAGTTTCTACCCGCATACTTGGATCCAAATCTCCAGCCAAGTGATTTGGCCACCGGTGTGTGCTTTGCATCCGGTGGTGCCGGATATGATCCTTTGACATCCCAGATAACGGCAGCTATACCACTATCCGGTCAAGTAGACATGTTCACAGAATACATAGGGAAGCTAAAAGAACTCGTAGGAGAGAACAGAACAAACTTCATCCTAGCCAACAGTTTTTTTGTTGTGGTATTAGGCAGCAATGACATTTCCAATGCATATTTTTTGCTTCGAATTAGGCAACTGCAATATGATGTTCATGCTTACACCGATTTTTTGGTCACTTCAGCTTCTAATTTTCTCAAGGAAATATACCAACTAGGTGCACGGAGGATTGGAGTATTCAGTGTGCCACCGATTGGGTGTGTTCCGTTTCAGAGAACAGTGGCCGGAGGAATAGCAAGAGAATGTGTAAAAGAATACAACGAAGCAGTGGAGTTATTTAACAGCAAATTGTCCATGGAGGCGGATTCCCTTAATCAGAATCTTCCAAATAGCAGGATTGTTTATATGGATATTTACTACCCTCTTCTTGATATCATTGCCAACAATCAAAAATATGGCTATGAAGTCGGAGACAGAGGGTGCTGTGGCACAGGCAAATTAGAGGTCTCGTTCTTATGCAACTATTTGGAATCCACGTGTCCGAACGTTATGGATTATGTGTTTTGGGACAGTTTTCACCCTACCGAAGCACTTTACAGAAAGCTTGTTCCGCCGGTTCTACAAAAATATATGTACAAGTTCCAGTGA 1110 0.4189 MALFMKLHSSLPNSICTSMLLRLMLFLIVSCKTEAILKIPPNVLFPAVLVFGDSIVDTGNNNENIQTAARCNFLPYGVDFEGGIPTGRFSNGKVPSDLVVEELGIKEFLPAYLDPNLQPSDLATGVCFASGGAGYDPLTSQITAAIPLSGQVDMFTEYIGKLKELVGENRTNFILANSFFVVVLGSNDISNAYFLLRIRQLQYDVHAYTDFLVTSASNFLKEIYQLGARRIGVFSVPPIGCVPFQRTVAGGIARECVKEYNEAVELFNSKLSMEADSLNQNLPNSRIVYMDIYYPLLDIIANNQKYGYEVGDRGCCGTGKLEVSFLCNYLESTCPNVMDYVFWDSFHPTEALYRKLVPPVLQKYMYKFQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2600g00001 369 Gene3D SGNH hydrolase 42 364 IPR036514 -
Gabi2600g00001 369 FunFam GDSL esterase/lipase APG 37 365 - -
Gabi2600g00001 369 SUPERFAMILY SGNH hydrolase 47 363 - -
Gabi2600g00001 369 CDD SGNH_plant_lipase_like 46 354 IPR035669 -
Gabi2600g00001 369 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 48 59 IPR008265 GO:0006629|GO:0016298
Gabi2600g00001 369 PANTHER GDSL ESTERASE/LIPASE EXL3 27 357 - -
Gabi2600g00001 369 Pfam GDSL-like Lipase/Acylhydrolase 48 356 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2600g00001 Gabi-Chr2600 7280 12315 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2600g00001 15 362 Pollen Coat Proteome AT1G75910 39.316 2.03e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2600g00001 - - gmx:100777186 538.11