Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi259g00002 ATGGGAACTGCGTGGAGGCAGTTGAAGGTTATGCTCAGGAAGAACTGGCTCCTCAAAATTCGTCATCCTTTCGTTACTTGCGCTGAGATTTTGCTCCCCACGGTTGTGGTGTTGCTGTTAGTAGCTGTAAGGACACAAGAGGATACGCAAATTCATCCAGCTCAACCGCACATTAATAAAGAGATGTTTGTGGAAGTAGGCAAAGGTATATCGCCTAACTTCCAACAACTTTTGGAATCGTTGTTGGATAAGGGAGAGTATTTAGCTTTTACACCAGATACAAATGAGACGAAGCTGATGATAGACATAGTGTCAATAAAATTTCCGCTCTTGAAGCTTGTTAGTAAAGTATACAAAGATGAGTTAGAGTTGGAAACCTACATCCGCTCAGATTCTTATGGTATCTGCAATCAAGCAAGGAATTGTTCAAATCCCAAAATTAAAGGAGCAGTTGTATTTTATGAACAAGGTCCCAGGTCATTTGATTATAGCATCCGCCTCAATCATACGTGGGCTTTCTCTGGTTTCCCAGATGTTACAACAATAATGGATACAAATGGCCCTTTTCTTAATGACTTGGAACTTGGTGTTAGTGCTGTTCCAACAATGCAATACAGTTTCAGCGGGTTTTTTACTCTCCAACAAATGGTTGATTCATTCATAATATTAATAGCTCAGCAGTATGACTTAAATTCGAGTGCTGAAAGGGTAGAGCTTCCTCTGCCAAGCTTCTATGACACTGATTTCTCTTTGAAAATTCCATGGACCCAGTTTAACCCTGCTCGCATACGAGTAGCTCCATTTCCCACTCGAGAGTACACTGATGACCAGTTCCAGTCAATCGTAAAGAAAGTCATGGGAATATTGTACTTACTGGGCTTTCTCTATCCAATATCTCGCCTGATCAGTTATTCCGTGTTTGAGAAGGAACAGAAGATTAAAGAAGGACTCTATATGATGGGCCTGAAAGATGGTATATTTCATCTCTCTTGGTTTATTACATATTCTTTGCAGTTCGCAATTTCTTCGGGGATCATTACAGCTTGCACCATGGATAATTTATTCAAGTATAGCGATAAGACACTGGTGTTTGCCTACTTTTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTTATATCAACATTTTTCAAACGAGCCAAAACAGCTGTAGCTGTTGGAACTCTGTCTTTTCTTGGTGCCTTTTTGCCTTATTACACTGTCAATGACGAGGGAGTTTCAATGGTCTTGAAGGTTATTGCTTCTTTGCTTTCACCAACGGCCTTTGCTCTCGGTTCTGTCAACTTTGCTGATTATGAACGTGCTCATGTTGGACTTCGTTGGAGCAACATATGGCGGGAATCATCAGGAGTGAACTTTTCTGCATGTTTTCTGATGATGATACTTGATACACTGCTATATTGTGCAATTGGTCTCTATTTTGATAAGGTTCTTCCAAGAGAGTATGGACTACAATATCCATGGAACTTTATTTTCCTAAAGGACTTCTGGAGGAAGAAAAATATTGTAAAACATTGTTCCTCCAATTTTAAAGTTAAAATTGCTGGTATGGATTCCGGGTCAAAAGGGAATCTTTTGGGGGAAGATACTTATAAAGCTGCTATAGAATCAATAAGCTTAGATATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGCTACTAAGAGAGGGGATTGCTGTGCCGTTAACTCATTACAGCTGACGTTGTATGAAAGTCAGATTCTTGCTCTTCTAGGACATAATGGAGCTGGGAAAAGCACGACAATCTCAATGCTTGTTGGTCTTCTTCCTCCTACTTCTGGGGATGCTTTGGTGTTTGGAAAGAACATTGTATCAGATATTGATGAGATACGGAAGATTTTGGGTGTTTGCCCACAACATGATATACTCTTTCCTGAATTGACTGTGAGAGAGCATTTAGAACTATTTGCCATATTAAAGGGTGCGGAGGAAGACTCATTGGATGATGTTGTTACTGACATGGCTGATGAGGTGGGCCTGGCTGATAAAATCAACAGTGTTGTGAGAGCTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCATTGATTGGAAACAGTAAGGTTATAGTTCTTGATGAACCTACTAGCGGAATGGATCCATACTCGATGCGCTTGACTTGGCAGTTAATAAAAAAAATTAAGAAGGGCAGGATAATTTTACTAACAACACATTCTATGGATGAAGCGGATGAACTAGGTGACCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCCCTTTTCTTGAAGCATCATTATGGAGTTGGATATACTCTAACTCTTGTGAAGTCAGCTCCTTCTGCTTCTATAGCTGGTGATATAGTATACCGTCATGTTCCATCAGCAACCTGTGTAAGCGAGGTCGGAACTGAGATTTCCTTCAGGCTTCCTATGGCCTCCTCATCAGCGTTTGAGAGGATGTTTAGGGAAATTGAAGGTTGCATGAAAAAACCAGTTTCAAACATGGAATTGAGTGGCAGTGGTGACAAAGACAGTCTTGGTATTGAAAGCTATGGTATATCTGTAACAACCCTGGAGGAGGTATTCTTGAGAGTTGCAGGATGTGACTATGAAGTTGAATGCTTAGAAGAAAATAACCATCTCCTAATATCAGACTCTATGGCTTGTTCTAATGATCGCCAATCCACAAAAATATGTTGTCTTGTAGTTTTTGGAAATTATAAGAAGATTCTTGGTTTCATATCTACCATGGTGGGAAGAGCTTGTGGTTTAATTTTTGCTACAGTTATTAGTTTCTTCGACTTCTTGAGTAGGCAATGTTGTGGCTGTTGTCTCATTACTAGGTCAACATTTTGGCAACATTCTAAAGCTTTATTCATTAAGAGGGCAATATCTGCTCGGAGAGATCACAAAACGATTATTTTCCAGCTAATGATTCCTGCTATCTTCTTGTTTATTGGTCTTCTATTTCTCAAGCTCAAGCCACATCCTGATCAACTGTCCCTGACTCTTTCAACTTCTTATTTTAATCCTCTGTTGAGTGGCGGGGGTGGGGGAGGTCCAATTCCGTTTAATCTATCTTTGCCAATTGCTGAAAAGGTAGCCCAAAATATCAAAGGAGGGTGGATTCAAAGGTTCAGACCAAGCTCGTACAAATTCCCTAATCAGGAAAAGGCACTAGCTGATGCAGTGGAAGCAGCAGGGTCAACTCTGGGACCTTCTCTCCTTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCGATTGTTATGGATGATCAGAATAATGATGGAAGCTTAAGCTACACTGTATTACACAACTTTTCTTGTCAACATTCTGCTCCCACCTTTATCAATTTGGTGAATTCTGCAATTCTTAGACTTGCTGCTCGTGACACAAATATGACAATTCAGACACGCAACCACCCTCTACCATTGACACAAAGTCAGCGCTTACAACGTCATGACCTGGATGCCTTCTCTGCTGCAATTATTGTCAATATTGCCTTCTCTTTTATACCTGCCTCATTTGCTGTTTCAGTTGTTAAGGAACGTGAAGTGAAAGCTAAGCACCAACAACTAATCAGTGGGGTTTCTATCCTTTCATATTGGGCTTCTACATTTATCTGGGACTTTGTGAGCTTCTTGTTTCCAGCCTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTCTGGATCAGTTTGTTGGAGGGGTTTCTTTGTTACCAACAACCGTCATGCTTTTGGAATATGGTCTTGCAATTGCATCGTCAACTTATTGCCTTACATTTTTCTTTTTTGACCATACCATGGCTCAGAATGTGGTTCTCCTCGTCCACTTTTTCTCTGGATTGATACTAATGATTATCTCATTCATTATGGGACTCATACCATCCACAATAAATGCCAATTCTTTTCTCAAGAATTTTTTCAGGATATCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCGTTAGCTCTTCTGCGACAAGAAATGAAAGATAAAACCAGTGATGGGGTGTATGATTGGAATGTTACTGGTGCCTCCATTTGTTATCTTGCTGTTGAGAGCTTTAGTTACTTTTTGTTGACACTCGCACTTGAATTTTTTCCTTCTCTCAAATTCACTTCATTCATGATCAAGAAGTGGTGGGGGCATATTAATATCTTCCAGCGTAATACTTCTTATCTGGAACCTCTGTTAGAACCTTCTTCAGATTCTGCTGTTATGGACCTTGACGAAGATGTAGATGTGAAAACAGAAAGAAATAGAGTACTTTCAGGTTCCCTTGACAATGCCATTATCTACTTACGTAATCTTCGTAAGGTGTATTATGAAGAGAAGTATCATGGGAAAAAGGTTGCAGTAGATTCATTAACCTTCTCAGTTCAGGAAGGAGAATGTTTTGGTTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGCTATGCGGGGAAGAATCTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGCTCCCATCCTAAGGCTGCTCGCCGATACATTGGATATTGTCCTCAATTCGATGCTTTATTGGAATTCTTAACTGTCAAAGAGCATCTTGAGCTTTATGCTAGAATTAAATGTGTTCCAGATTATGCAATAGATAAGGTTGTTAGGGAAAAGTTGGTGGAGTTTGACTTATTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGGAAACTGTCAGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAGCCTTCCACAGGTATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGACGGGGAAAGACGGCAGTAATTCTTACCACCCACAGCATGAATGAAGCTCAAGCCTTATGTACCAGAATAGGGATAATGGTTGGTGGACGATTAAGATGCATTGGGAGTCCACAGCATCTAAAAACAAGATTTGGGAATCACTTGGAACTAGAGATAAAACCTACTGAAGTGAGTTCTGTGGACTTACAAACACTCTGCCAAGCTATTCAGGAAAGACTTTTTGATGTCCCTTCTCATCCTAGAAGCTTACTGAATGACCTTGAAATTTGCATTGGGGCTGGGGGCACTGACTCCATTACCTCAGAAAATACCTCCATTGCAGAGATTAGCTTGACACAAGAAATGATAGGCTTAATTGGATGCTGGCTTGGCAATGAAGATAGAGTAAAGACACTAATCTCTTGTACACCTGTTTATGATGGAGCTTCTCAAGAACAGTTATCAGAACAACTGTTTCGAGATGGTGGTATTCCATTGCCAGTATTTTCTGAATGGTGGTTGTCCAAACAAAAATTCTCTGAAATTGATTCATTTATTCTCTCTTCATTTCGTGGAGCTAGATGCCAAGGTTGCAATGGTTTGAGTATCAGATACCAGTTACCATATGATGAGGGTTTTTCGCTGGCAGATGTTTTTGGACTTCTTGAAGGAAACAGAAAAAGATTAGGGATTGCAGAGTACAGCATCAGCCAGTCAACTCTGGAAACAATATTTAATCATTTTGCCGCTAACTCATGA 5676 0.3999 MGTAWRQLKVMLRKNWLLKIRHPFVTCAEILLPTVVVLLLVAVRTQEDTQIHPAQPHINKEMFVEVGKGISPNFQQLLESLLDKGEYLAFTPDTNETKLMIDIVSIKFPLLKLVSKVYKDELELETYIRSDSYGICNQARNCSNPKIKGAVVFYEQGPRSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAVPTMQYSFSGFFTLQQMVDSFIILIAQQYDLNSSAERVELPLPSFYDTDFSLKIPWTQFNPARIRVAPFPTREYTDDQFQSIVKKVMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYSLQFAISSGIITACTMDNLFKYSDKTLVFAYFFIFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFLPYYTVNDEGVSMVLKVIASLLSPTAFALGSVNFADYERAHVGLRWSNIWRESSGVNFSACFLMMILDTLLYCAIGLYFDKVLPREYGLQYPWNFIFLKDFWRKKNIVKHCSSNFKVKIAGMDSGSKGNLLGEDTYKAAIESISLDMKQQELDGRCIQIRNLHKVYATKRGDCCAVNSLQLTLYESQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKILGVCPQHDILFPELTVREHLELFAILKGAEEDSLDDVVTDMADEVGLADKINSVVRALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPSASIAGDIVYRHVPSATCVSEVGTEISFRLPMASSSAFERMFREIEGCMKKPVSNMELSGSGDKDSLGIESYGISVTTLEEVFLRVAGCDYEVECLEENNHLLISDSMACSNDRQSTKICCLVVFGNYKKILGFISTMVGRACGLIFATVISFFDFLSRQCCGCCLITRSTFWQHSKALFIKRAISARRDHKTIIFQLMIPAIFLFIGLLFLKLKPHPDQLSLTLSTSYFNPLLSGGGGGGPIPFNLSLPIAEKVAQNIKGGWIQRFRPSSYKFPNQEKALADAVEAAGSTLGPSLLSMSEYLMSSFNESYQSRYGAIVMDDQNNDGSLSYTVLHNFSCQHSAPTFINLVNSAILRLAARDTNMTIQTRNHPLPLTQSQRLQRHDLDAFSAAIIVNIAFSFIPASFAVSVVKEREVKAKHQQLISGVSILSYWASTFIWDFVSFLFPASFAIVLFYIFGLDQFVGGVSLLPTTVMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLVHFFSGLILMIISFIMGLIPSTINANSFLKNFFRISPGFCFADGLASLALLRQEMKDKTSDGVYDWNVTGASICYLAVESFSYFLLTLALEFFPSLKFTSFMIKKWWGHINIFQRNTSYLEPLLEPSSDSAVMDLDEDVDVKTERNRVLSGSLDNAIIYLRNLRKVYYEEKYHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARRYIGYCPQFDALLEFLTVKEHLELYARIKCVPDYAIDKVVREKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEIKPTEVSSVDLQTLCQAIQERLFDVPSHPRSLLNDLEICIGAGGTDSITSENTSIAEISLTQEMIGLIGCWLGNEDRVKTLISCTPVYDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGCNGLSIRYQLPYDEGFSLADVFGLLEGNRKRLGIAEYSISQSTLETIFNHFAANS 1891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi259g00002 1891 ProSitePatterns ABC transporters family signature. 1598 1612 IPR017871 GO:0005524|GO:0016887
Gabi259g00002 1891 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Gabi259g00002 1891 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524|GO:0016887
Gabi259g00002 1891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 797 IPR027417 -
Gabi259g00002 1891 Pfam ABC-2 family transporter protein 146 480 IPR013525 GO:0016020|GO:0140359
Gabi259g00002 1891 Pfam ABC-2 family transporter protein 989 1391 IPR013525 GO:0016020|GO:0140359
Gabi259g00002 1891 Gene3D - 1453 1702 IPR027417 -
Gabi259g00002 1891 Gene3D - 547 795 IPR027417 -
Gabi259g00002 1891 CDD ABC_subfamily_A 560 781 - -
Gabi259g00002 1891 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1093 1395 IPR026082 GO:0016020|GO:0055085|GO:0140359
Gabi259g00002 1891 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1461 1699 IPR003439 GO:0005524
Gabi259g00002 1891 Pfam ABC transporter 1483 1625 IPR003439 GO:0005524
Gabi259g00002 1891 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Gabi259g00002 1891 CDD ABC_subfamily_A 1461 1687 - -
Gabi259g00002 1891 FunFam ATP-binding cassette sub-family A member 12 552 797 - -
Gabi259g00002 1891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1456 1693 IPR027417 -
Gabi259g00002 1891 SMART AAA_5 1491 1678 IPR003593 GO:0016887
Gabi259g00002 1891 SMART AAA_5 588 770 IPR003593 GO:0016887
Gabi259g00002 1891 FunFam ABC transporter A family member 1 1450 1704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi259g00002 Gabi-Chr259 8963 75151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi259g00002 560 796 Calmodulin-binding Proteins AT2G36910 25.101 8.33e-16 82.0