Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00094 ATGGCATCTTGCATATTCACGGTGTCACCGGACGGAACCGGTGATTTCCAAACGGTGCAGGAAGCGATCGACGTTGTGCCGCTCGGCAACACTCGCCGGACGGTGATTCGGGTGTCGCCTGGAATCTACCGGCAGCCGGTGTACGTGCCCAAGACCAAGAACTTCATCACCCTTGCTGGTTTGAGCCGTGAGGACACTGTGCTTACATGGAACAACACTGCCACCAAAATCGATCACCACCAACCCGCTAGGTTGATAGGGACTGGGACTTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATTACTTTTGAAAATTCTTCCCCTGAGGGTTCAGGGCAAGCAGTGGCAATTAGAGTAACAGCAGATCGGTGTGCCTTCTACAATTGTAGGTTCCTCGGATGGCAGGACACACTGTACTTACATTACGGAAAACAATATTTGAAAGATTGCTATATTGAAGGAAGTGTAGACTTTATCTTTGGCAATAGCACTGCTCTTTTGGAACACTGTCATATCCACTGCAAGTCTCCAGGGTTCGTAACTGCACAGGGAAGAAAATCTTCACAGGAAACAACTGGTTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGGAAATTCATATGCATATCTTGGACGACCATGGGGACCTTTTGGAAGGGTGATCTTTGCGTACACTTATATGGATCCATGTATAAGGCATGTTGGCTGGGATAACTGGGGGAAAATTGAGAATGAAAGAAGCGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCATCCAAACGAGTAACATGGTCTAGAGAATTGGTGGATGAAGAAGCAGATCAGTTCCTCATGCATCCTTTCATTGACCCAGAACCAGATAAACCTTGGCTTGCTCAAAGAATGGCCTTGAGAATTCCATATTCTGCTTAG 951 0.4627 MASCIFTVSPDGTGDFQTVQEAIDVVPLGNTRRTVIRVSPGIYRQPVYVPKTKNFITLAGLSREDTVLTWNNTATKIDHHQPARLIGTGTFGCGSTIVEGEDFIAENITFENSSPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSPGFVTAQGRKSSQETTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVIFAYTYMDPCIRHVGWDNWGKIENERSACFYEYRCFGPGCCPSKRVTWSRELVDEEADQFLMHPFIDPEPDKPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00094 316 Gene3D - 3 310 IPR012334 -
Gabi2596g00094 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Gabi2596g00094 316 FunFam Pectinesterase 2 309 - -
Gabi2596g00094 316 SUPERFAMILY Pectin lyase-like 3 299 IPR011050 -
Gabi2596g00094 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Gabi2596g00094 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00094 Gabi-Chr2596 941177 946345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00094 5 309 Carbohydrate Esterase AT5G47500 37.580 2.56e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00094 K01051 - gmx:100786786 632.484