Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00085 ATGTCCAATACCAACCCCGATTCAGTCACGGCGCCGCCACAGCGCCCAACCATAACTCTCCCGCCGCGTCCCTCCGCCGAGGCTTTCTTCGCCGGCGGCGGCGGCGCAAGTCCCGGCCCCATGACCCTCGTCTCCAGCTTCTTCTCCTCCGACTCCGGCGACTGCCGCTCCTTCTCGCAGCTCCTTGCCGGAGCCATGGCCTCCCCACTGGCGTTCGGCGCCGCCGCAGCTAGGCCCACCACCGCCGACAATTACGGCAAAGAAGACGATCACAAGAACGTGGGGTTCAAGCAGAGTAGACCCATGAATTTGATGATTGCTCGTTCCCCAATCTTCACAATCCCTCCAGGGTTGAGCCCTTCCGGGTTTCTCAACTCACCAGGCTTCTTTTCCCCACAGAGCCCTTTTGGGATGTCCCACCAACAGGCTTTAGCACAAGTTACAGCTCAAGCTGTCCTAGCACAATCTCATATGCACATGCAAGCTGATTACCAGCCATCTACTGTAACAGCTCCCACTGAACCATTGGTAGAGCAGCCATCTTTTACTCTAAATGAAGCTTCAGAGCAGCCAGTGGTGGCATCTGTATCAGAACCTAGAAATGCTCAAATGGAAATGTCAGAGCTTTCACATCCTGATAAGAAATATCAACCATCTTCCCTGGCCATTGACAAACCTGCCGATGATGGTTACAACTGGCGTAAGTATGGACAGAAACAGGTTAAGGGGAGTGAGTATCCACGGAGCTACTACAAGTGTACACATCTGAATTGCCTTGTGAAGAAAAAAGTTGAGCGTGCCCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAAGCAAATAGGCGTATCAAAGATAATAGTGATTCAAATGGAAATGCAAGCATTCAACCTAAGTCTGAGTCAACTTGGGTTGGAAATGTAAACAACTTTACTGAAAACGTGCCTGATTGTTCAGTGCCTGAGACTGACCAGACTTCCAATCAAGAGGCTCCAAGGCAACTACCTGGATCAAGTGAGAGTGAGGAAGTGGGTGATGTAGATAACAGGGAAGAGGGAGATGACAATGAGCCAAAACCTAAGAGAAGGAACACTGATCCTGTGGTTTCTGAAGTACCTCTGTCTCAGAAGACTGTCACAGAGCCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGCTATAGGTGGCGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTAGTGCAGGATGCAATGTGCGTAAGCATGTTGAGAGAGCTTCAACGGACCCCAAAGCTGTCATAACAACATATGAGGGAAAACATAATCATGATGTGCCTGCTGCAAGAAACAGCAGCCACAACACAGCTAATAGCAATTCAATGCCATTAAAACCACATAATGTGGTACCGGAGAAGCATCCCTTGCTTAAAGATATGGAATTTGGAAGTAATGACCAAAGACCCGTACATTTACGCTTAAAAGAAGAGCAAATCATAGTATAA 1554 0.4807 MSNTNPDSVTAPPQRPTITLPPRPSAEAFFAGGGGASPGPMTLVSSFFSSDSGDCRSFSQLLAGAMASPLAFGAAAARPTTADNYGKEDDHKNVGFKQSRPMNLMIARSPIFTIPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADYQPSTVTAPTEPLVEQPSFTLNEASEQPVVASVSEPRNAQMEMSELSHPDKKYQPSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCLVKKKVERAPDGHITEIIYKGQHNHEKPQANRRIKDNSDSNGNASIQPKSESTWVGNVNNFTENVPDCSVPETDQTSNQEAPRQLPGSSESEEVGDVDNREEGDDNEPKPKRRNTDPVVSEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTANSNSMPLKPHNVVPEKHPLLKDMEFGSNDQRPVHLRLKEEQIIV 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 187 204 - -
Gabi2596g00085 517 SMART WRKY_cls 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 SMART WRKY_cls 403 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 SUPERFAMILY WRKY DNA-binding domain 226 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 ProSiteProfiles WRKY domain profile. 222 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 360 374 - -
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 459 482 - -
Gabi2596g00085 517 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 126 478 IPR044810 GO:0003700
Gabi2596g00085 517 Gene3D WRKY domain 217 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 Gene3D WRKY domain 388 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 293 344 - -
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 276 292 - -
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 465 481 - -
Gabi2596g00085 517 SUPERFAMILY WRKY DNA-binding domain 395 463 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 276 381 - -
Gabi2596g00085 517 ProSiteProfiles WRKY domain profile. 398 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 FunFam WRKY transcription factor 216 287 - -
Gabi2596g00085 517 FunFam WRKY transcription factor 33 390 456 - -
Gabi2596g00085 517 MobiDBLite consensus disorder prediction 187 218 - -
Gabi2596g00085 517 Pfam WRKY DNA -binding domain 228 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00085 517 Pfam WRKY DNA -binding domain 404 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00085 Gabi-Chr2596 860495 865622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00085 15 515 WRKY Transcription Factor Family AT2G03340 53.788 9.05e-152 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2596g00085 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00085 - - gmx:100796679 853.588