Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00084 ATGTCCAATACCAACCCCGATTCAGTCACGGCGCCGCCACAGCGCCCAACCATAACTCTCCCGCCGCGTCCCTCCGCCGAGGCTTTCTTCGCCGGCGGCGGCGGCGCAAGTCCCGGCCCCATGACCCTCGTCTCCAGCTTCTTCTCCTCCGACTCCGGCGACTGCCGCTCCTTCTCGCAGCTCCTTGCCGGAGCCATGGCCTCCCCACTGGCGTTCGGCGCCGCCGCAGCTAGGCCCACCACCGCCGACAATTACGGCAAAGAAGACGATCACAAGAACGTGGGGTTCAAGCAGAGTAGACCCATGAATTTGATGATTGCTCGTTCCCCAATCTTCACAATCCCTCCAGGGTTGAGCCCTTCCGGGTTTCTCAACTCACCAGGCTTCTTTTCCCCACAGGTAATTAGCCCTTTTGGGATGTCCCACCAACAGGCTTTAGCACAAGTTACAGCTCAAGCTGTCCTAGCACAATCTCATATGCACATGCAAGCTGATTACCAGCCATCTACTGTAACAGCTCCCACTGAACCATTGGTAGAGCAGCCATCTTTTACTCTAAATGAAGCTTCAGAGCAGCCAGTGGTGGCATCTGTATCAGAACCTAGAAATGCTCAAATGGAAATGTCAGAGCTTTCACATCCTGATAAGAAATATCAACCATCTTCCCTGGCCATTGACAAACCTGCCGATGATGGTTACAACTGGCGTAAGTATGGACAGAAACAGGTTAAGGGGAGTGAGTATCCACGGAGCTACTACAAGTGTACACATCTGAATTGCCTTGTGAAGAAAAAAGTTGAGCGTGCCCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAAGCAAATAGGCGTATCAAAGATAATAGTGATTCAAATGGAAATGCAAGCATTCAACCTAAGTCTGAGTCAACTTGGGTTGGAAATGTAAACAACTTTACTGAAAACGTGCCTGATTGTTCAGTGCCTGAGACTGACCAGACTTCCAATCAAGAGGCTCCAAGGCAACTACCTGGATCAAGTGAGAGTGAGGAAGTGGGTGATGTAGATAACAGGGAAGAGGGAGATGACAATGAGCCAAAACCTAAGAGAAGGAACACTGATCCTGTGGTTTCTGAAGTACCTCTGTCTCAGAAGACTGTCACAGAGCCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGCTATAGGTGGCGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTAGTGCAGGATGCAATGTGCGTAAGCATGTTGAGAGAGCTTCAACGGACCCCAAAGCTGTCATAACAACATATGAGGGAAAACATAATCATGATGTGCCTGCTGCAAGAAACAGCAGCCACAACACAGCTAATAGCAATTCAATGCCATTAAAACCACATAATGTGGTACCGGAGAAGCATCCCTTGCTTAAAGATATGGAATTTGGAAGTAATGACCAAAGACCCGTACATTTACGCTTAAAAGAAGAGCAAATCATAGTATAA 1560 0.4795 MSNTNPDSVTAPPQRPTITLPPRPSAEAFFAGGGGASPGPMTLVSSFFSSDSGDCRSFSQLLAGAMASPLAFGAAAARPTTADNYGKEDDHKNVGFKQSRPMNLMIARSPIFTIPPGLSPSGFLNSPGFFSPQVISPFGMSHQQALAQVTAQAVLAQSHMHMQADYQPSTVTAPTEPLVEQPSFTLNEASEQPVVASVSEPRNAQMEMSELSHPDKKYQPSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCLVKKKVERAPDGHITEIIYKGQHNHEKPQANRRIKDNSDSNGNASIQPKSESTWVGNVNNFTENVPDCSVPETDQTSNQEAPRQLPGSSESEEVGDVDNREEGDDNEPKPKRRNTDPVVSEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTANSNSMPLKPHNVVPEKHPLLKDMEFGSNDQRPVHLRLKEEQIIV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00084 519 MobiDBLite consensus disorder prediction 467 483 - -
Gabi2596g00084 519 MobiDBLite consensus disorder prediction 278 294 - -
Gabi2596g00084 519 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 127 480 IPR044810 GO:0003700
Gabi2596g00084 519 SUPERFAMILY WRKY DNA-binding domain 228 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2596g00084 519 Gene3D WRKY domain 390 466 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 Gene3D WRKY domain 219 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 Pfam WRKY DNA -binding domain 406 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 Pfam WRKY DNA -binding domain 230 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 FunFam WRKY transcription factor 33 392 458 - -
Gabi2596g00084 519 FunFam WRKY transcription factor 218 289 - -
Gabi2596g00084 519 SUPERFAMILY WRKY DNA-binding domain 397 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 SMART WRKY_cls 405 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 SMART WRKY_cls 229 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 MobiDBLite consensus disorder prediction 278 382 - -
Gabi2596g00084 519 ProSiteProfiles WRKY domain profile. 224 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 ProSiteProfiles WRKY domain profile. 400 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2596g00084 519 MobiDBLite consensus disorder prediction 461 484 - -
Gabi2596g00084 519 MobiDBLite consensus disorder prediction 362 376 - -
Gabi2596g00084 519 MobiDBLite consensus disorder prediction 295 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00084 Gabi-Chr2596 860495 865623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00084 15 517 WRKY Transcription Factor Family AT2G03340 53.585 3.61e-151 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2596g00084 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00084 - - gmx:100796679 848.58