Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00080 ATGGGTTCCTATTCTAATAACGAGAAAGAGAACCATGCCATGAAAACACCCAATGACATTGATACCCTCTCTGCCATGGTGCTTGGTTCCAATGTGGTCTTTCCTGCAGCACTTAATGCTGCAATTGAACTCAAACTATTTGAGATCATTGCCAAGGAAAGCTCACTATATAATAGTGATGGATTCATGTCATCTTTTGAAATTGCTTCAAAGCTACCAAACCAACACTCAGACTTGCCAAATAGGCTTGACCGTGTGTTACGCTTGCTTGCTAGTTACTCTCTTCTTACTCTTTCCACTCGCACCATTGAGGATGTTACCACTCTCACAGTTTATGGTATCTCACCATCTGGTAAATATTTTGTTAATGATGAAAATGGTTATGGAAATAATGGTGATGGTTATTTGGCTTCATTCACATTATTTCTGTGTCACCGTGCTATGTTAGGTGTATGGCTGAATTTTAAGGAAGCAGTTATTAATCCTGAGATTGATGTATTCAAGAAAGTTAATGGAATGTCTAAGTTCGAGTACTTTGGGAAAGAACCAGAAATGAATAGTGTCTTCAACAAACCAATGGCTGATATATGCACAACCCATATGAAAAAAATACTTGAAATATACACAGGGTATGAGGGATTATCAACTTTGGTTGATGTAGGAGGTGGAATTGGACAAGGTCTCAATATGATCATCACCAAATACCCTTCAATTAAAGGGATTAATTATGACCTCCCTCAAGTGATTGAAAATGCACCACCCTTTCCGGGGATTGAGCATATTGGAGGAAATATGTTTGAAAGTGTTCCACAGGGTGATGCCATAATGCTAAAGGCTATAATCCATAATTGGTCCGATGAAAAATGCTTGCAACTTTTAAGCAATTGTCACAAGGCTTTGCCACCAAATGGGAAGGTCATTATCGGGGAGCTCATACTGCCAGAAGATCCAGAACCTAAAAATGAATATAAAATGATTTCAATTCTTGATAACATCATGTTTATTACTCCTGGTGGAAGGGAAAGAACTGAGAAACAATACAAGAGTTTGGGCAAGCGCTCTGGATTTTCTAGGTTTCAAGTTGTTTGTCGTGCTTTCTCTGCTTTGGGAGTGATGGAGTTTTACAAATAA 1131 0.3846 MGSYSNNEKENHAMKTPNDIDTLSAMVLGSNVVFPAALNAAIELKLFEIIAKESSLYNSDGFMSSFEIASKLPNQHSDLPNRLDRVLRLLASYSLLTLSTRTIEDVTTLTVYGISPSGKYFVNDENGYGNNGDGYLASFTLFLCHRAMLGVWLNFKEAVINPEIDVFKKVNGMSKFEYFGKEPEMNSVFNKPMADICTTHMKKILEIYTGYEGLSTLVDVGGGIGQGLNMIITKYPSIKGINYDLPQVIENAPPFPGIEHIGGNMFESVPQGDAIMLKAIIHNWSDEKCLQLLSNCHKALPPNGKVIIGELILPEDPEPKNEYKMISILDNIMFITPGGRERTEKQYKSLGKRSGFSRFQVVCRAFSALGVMEFYK 376
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00080 376 FunFam Caffeic acid O-methyltransferase 130 376 - -
Gabi2596g00080 376 FunFam Caffeic acid 3-O-methyltransferase 4 121 - -
Gabi2596g00080 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 376 IPR016461 GO:0008168
Gabi2596g00080 376 Pfam Dimerisation domain 37 91 IPR012967 GO:0046983
Gabi2596g00080 376 Pfam O-methyltransferase domain 152 357 IPR001077 GO:0008171
Gabi2596g00080 376 Gene3D Vaccinia Virus protein VP39 129 376 IPR029063 -
Gabi2596g00080 376 PANTHER O-METHYLTRANSFERASE 25 366 IPR016461 GO:0008168
Gabi2596g00080 376 Gene3D - 1 121 IPR036388 -
Gabi2596g00080 376 PIRSF O-mtase 3 376 IPR016461 GO:0008168
Gabi2596g00080 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 373 IPR029063 -
Gabi2596g00080 376 SUPERFAMILY "Winged helix" DNA-binding domain 24 125 IPR036390 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi2596g00080 Gabi-Chr2596 831506 832998 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00080 5 366 Monolignol Biosynthesis Gene Families AT5G54160 47.658 6.74e-113 332
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00080 - - gmx:100798295 559.681