Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00079 ATGGGTTCCAATTCTTCAGAGAAAGAGAACCCTGCCTCACAAAAAGATGACACTGATACCCTCTATGCCATGGTACTTGGTGCCAATATGGTGTTTCCTGCTGCCCTTAACGCTGCAATTGAACTCAACCTATTTGAGATCATTGCTAAGGGAAGTTCACCAAATAGTGATGGATTCATGTTAGCTTCTGAAATTGCTTCAAAGCTACCAAACCAACACTCAGACTTGCCAAATAGGCTTGATCGTATGCTGCGTTTACTTGTCAGCTACTCTCTTCTCTCTATTTCCACTCGCACCAATGACGATGGTAGCATTGAGAGAGTTTATGGACTCTCACCATCTGGAAAATATTTCGTCTATGATGAAAATAGTGATGGTTATCTCTCTTCATTCACTTCATTTCTCTGTCACCGTGCTTTGTTAGGAGTATGGCTGAATTTTAAGGAAGCAGTTGTTGATCCTGAGATTGACCTATTCAAGAAAGTTCATGGAATATCAAAGTACGAGTTCTTCGGGAAAGATCCACAGATAAACCAAGTATTTAACCAATCAATGACTGATATATGCTCAACCCATATGAAGAGAATACTTGAAATATACACAGGCTATGAGGGAATATCAACTTTGGTTGATGTTGGAGGTGGAAATGGACAGTGTCTTAAAATGATCATCTCCAAATACCCTTCAATTAAGGCCATTAATTTTGACCTCCCGCAAGTCATTGAAAATGCACCACCTATTCCGGGGATTGAGCATGTTGGAGGAAGTATGTTTGAAAGTGTTCCACATGGTGATGCCATAATACTAAAGGCTGTATGCCATAATTGGTCGGATGACAAATGCTTGGAAATTTTAAGCAATTGTCACAAAGCTTTGCCACCAAACGGGAAGGTCATTGTTGTGGAGCTCGTGCTGCCAGAAAATCCAGAACCAACAGATGCATCCAAAATGATTTCAATTCTTGATAACATCATGTTCATTACAGCTGGTGGAAGGGAAAGAACTGAAAAACAATATGAGAGTTTGGGAAAACGCTCTGGATTTTCAAAGTTTCAAGTTGTTTGTCGCGCTTTCTCTATTTTGGGAGTGATGGAGTTCCACAAATAA 1107 0.4011 MGSNSSEKENPASQKDDTDTLYAMVLGANMVFPAALNAAIELNLFEIIAKGSSPNSDGFMLASEIASKLPNQHSDLPNRLDRMLRLLVSYSLLSISTRTNDDGSIERVYGLSPSGKYFVYDENSDGYLSSFTSFLCHRALLGVWLNFKEAVVDPEIDLFKKVHGISKYEFFGKDPQINQVFNQSMTDICSTHMKRILEIYTGYEGISTLVDVGGGNGQCLKMIISKYPSIKAINFDLPQVIENAPPIPGIEHVGGSMFESVPHGDAIILKAVCHNWSDDKCLEILSNCHKALPPNGKVIVVELVLPENPEPTDASKMISILDNIMFITAGGRERTEKQYESLGKRSGFSKFQVVCRAFSILGVMEFHK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00079 368 FunFam Caffeic acid 3-O-methyltransferase 3 118 - -
Gabi2596g00079 368 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
Gabi2596g00079 368 PANTHER O-METHYLTRANSFERASE 23 348 IPR016461 GO:0008168
Gabi2596g00079 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 365 IPR029063 -
Gabi2596g00079 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 368 IPR016461 GO:0008168
Gabi2596g00079 368 CDD AdoMet_MTases 208 301 - -
Gabi2596g00079 368 Gene3D - 2 118 IPR036388 -
Gabi2596g00079 368 FunFam Caffeic acid O-methyltransferase 122 368 - -
Gabi2596g00079 368 PIRSF O-mtase 1 368 IPR016461 GO:0008168
Gabi2596g00079 368 Pfam O-methyltransferase domain 144 349 IPR001077 GO:0008171
Gabi2596g00079 368 Pfam Dimerisation domain 35 88 IPR012967 GO:0046983
Gabi2596g00079 368 SUPERFAMILY "Winged helix" DNA-binding domain 16 122 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00079 Gabi-Chr2596 809643 812595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00079 1 360 Monolignol Biosynthesis Gene Families AT5G54160 47.790 1.53e-118 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00079 - - gmx:100798295 565.844