Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00075 ATGCCAAACTTCTTCTCTCTTCCACGGTTATTCTACGAGGAAAGGAATCCTCCAAGCATATATAACAATGGTGGAGACAGTGTCACTCCTGTTTCCATAACTGATGACAGCCCAAATAGCAGTGCTGTGGAGTGTTACGCCTGCACGCAAGTAGGCGTGCCGGTGTTCCACTCCACGAGCTGTGACAGCTGTCATCAGCCACAGTGGGAGGCATCCGCGGGTTCCTCTTTGATTCCAATTCAGAACCAACCCGGAAATAATGGGCCGGGTGTTAGGGTCGGGTTTAGGACAAAGTCGGGTCCGTTCGGGCGGGTTTTGGATCCGAGGAGCAAGCGCGTGCAGGTGTGGAACCGTGCGTTATTGATAGCGCGTGGGGTGGCGCTGGCTATTGATCCGTTGTTTTTCTACGCGCTGTCGATCGGGAGGGAGGGGACGCCGTGTTTGTATATGGATGGGGGGCTGGCGGCGATGGTGACGGTGGCGCGGACGTGTGTGGATGCTGTGCATTTGTTCCACCTGTGGCTGCAGTTCAAGCTGGCGTACGTGTCGAGGGAGTCGCTTGTGGTTGGGTGCGGGAAACTCGTGTGGGATGCACGTGCCATCGCCAACCATTACCTGCGGTCAGTCAAGGGCTTCTGGTTCGACGCATTTGTCATCCTCCCTGTTCCCCAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTCATTGCTTCCCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCTATTCAACGCGTTGCATCATGCCTCCGGCAGCAGTGTGAAAGAACTCATGGATGCAATCTCTCTCTGTCATGCTCAGAGGAGGTATGCTACCAGTTTTTGTTACCAACAGGCACGACAGGAAATCCATGTGGTGGAAACTCAACAGTGGTAAGAAAGCCTTTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCAGTCATATCCAGCAACTCTTTGGCTGTCAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACTCTCAGCACTTTCGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATCTTCAGCATATGCATTGTACTCAGTGGACTACTGCTTTTCACTTTGTTGATTGGTAACATCCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGGGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCCCGATTAAGACAAAGAGTTCGCCATTTTGAACGTCAGAGATGGGCAGCCATGGGAGGAGAAGATGAGATGGAGTTGATCAAAGACTTGCCTGAGGGGCTGAGGAGGGACATCAAGCGCTATCTTTGCCTAGACCTCATTAAAAAGGTTCCTTTGTTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAGCCCCTAGTCTTCTCTAAAGATGAAAAGATAATTAGAGAAGGTGATCCTGTACCAAGGATTGTGTTCATTGTTCGCGGACGCATAAAACGCAACCAAAGTCTCAGCAAAGGCATGGTAGCCTCTAGTATCCTCGAACCAGGAGGTTTTTTGGGTGATGAGCTACTTTCCTATTGCCTTCGCAGACCATTTATGGATAGGCTTCCAGCTTCCTCAGCCACATTTGTATGCCTTGAATCAGTAGAAGCCTTTGGTCTTGATGCTGATAACTTGAGGTACATCACTGATCACTTCCGCTACAAATTTGCCAATGAGAGACTAAAGAGAACTGCAAGATATTACTCATCCAATTGGAGAACATGGGCTGCTGTCAACATTCAATTAGCTTGGAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACTCCTGTAAGGGACAATGGAGGCACTGAGCGGAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATAAGGCCTCATGACCATCTTGAATGA 2022 0.4886 MPNFFSLPRLFYEERNPPSIYNNGGDSVTPVSITDDSPNSSAVECYACTQVGVPVFHSTSCDSCHQPQWEASAGSSLIPIQNQPGNNGPGVRVGFRTKSGPFGRVLDPRSKRVQVWNRALLIARGVALAIDPLFFYALSIGREGTPCLYMDGGLAAMVTVARTCVDAVHLFHLWLQFKLAYVSRESLVVGCGKLVWDARAIANHYLRSVKGFWFDAFVILPVPQVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTHGCNLSLSCSEEVCYQFLLPTGTTGNPCGGNSTVVRKPLCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRIVFIVRGRIKRNQSLSKGMVASSILEPGGFLGDELLSYCLRRPFMDRLPASSATFVCLESVEAFGLDADNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWRRYRQRTRGPVTPVRDNGGTERRLLQYAAMFMSIRPHDHLE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00075 673 CDD CAP_ED 486 596 IPR000595 -
Gabi2596g00075 673 Pfam Ion transport protein 115 404 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi2596g00075 673 SUPERFAMILY cAMP-binding domain-like 413 600 IPR018490 -
Gabi2596g00075 673 Gene3D Jelly Rolls 484 602 IPR014710 -
Gabi2596g00075 673 SUPERFAMILY Voltage-gated potassium channels 107 407 - -
Gabi2596g00075 673 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 222 639 - -
Gabi2596g00075 673 Gene3D Helix hairpin bin 412 477 - -
Gabi2596g00075 673 ProSiteProfiles cAMP/cGMP binding motif profile. 486 596 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00075 Gabi-Chr2596 757481 763705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00075 36 673 Ion Channels AT5G15410 74.963 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00075 K05391 - gmx:100798823 1157.13