Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00074 ATGCCAAACTTCTTCTCTCTTCCACGGTTATTCTACGAGGAAAGGAATCCTCCAAGCATATATAACAATGGTGGAGACAGTGTCACTCCTGTTTCCATAACTGATGACAGCCCAAATAGCAGTGCTGTGGAGTGTTACGCCTGCACGCAAGTAGGCGTGCCGGTGTTCCACTCCACGAGCTGTGACAGCTGTCATCAGCCACAGTGGGAGGCATCCGCGGGTTCCTCTTTGATTCCAATTCAGAACCAACCCGGAAATAATGGGCCGGGTGTTAGGGTCGGGTTTAGGACAAAGTCGGGTCCGTTCGGGCGGGTTTTGGATCCGAGGAGCAAGCGCGTGCAGGTGTGGAACCGTGCGTTATTGATAGCGCGTGGGGTGGCGCTGGCTATTGATCCGTTGTTTTTCTACGCGCTGTCGATCGGGAGGGAGGGGACGCCGTGTTTGTATATGGATGGGGGGCTGGCGGCGATGGTGACGGTGGCGCGGACGTGTGTGGATGCTGTGCATTTGTTCCACCTGTGGCTGCAGTTCAAGCTGGCGTACGTGTCGAGGGAGTCGCTTGTGGTTGGGTGCGGGAAACTCGTGTGGGATGCACGTGCCATCGCCAACCATTACCTGCGGTCAGTCAAGGGCTTCTGGTTCGACGCATTTGTCATCCTCCCTGTTCCCCAGGCTGTGTTTTGGTTAATAGTACCAAAGTTGATAAGAGAAGAGCAAATTAAAATCATTATGACCATAATGCTATTAATTTTTTTGTTCCAATTTCTCCCAAAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTCATTGCTTCCCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCTATTCAACGCGTTGCATCATGCCTCCGGCAGCAGTGTGAAAGAACTCATGGATGCAATCTCTCTCTGTCATGCTCAGAGGAGGTATGCTACCAGTTTTTGTTACCAACAGGCACGACAGGAAATCCATGTGGTGGAAACTCAACAGTGGTAAGAAAGCCTTTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCAGTCATATCCAGCAACTCTTTGGCTGTCAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACTCTCAGCACTTTCGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATCTTCAGCATATGCATTGTACTCAGTGGACTACTGCTTTTCACTTTGTTGATTGGTAACATCCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGGGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCCCGATTAAGACAAAGAGTTCGCCATTTTGAACGTCAGAGATGGGCAGCCATGGGAGGAGAAGATGAGATGGAGTTGATCAAAGACTTGCCTGAGGGGCTGAGGAGGGACATCAAGCGCTATCTTTGCCTAGACCTCATTAAAAAGGTTCCTTTGTTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAGCCCCTAGTCTTCTCTAAAGATGAAAAGATAATTAGAGAAGGTGATCCTGTACCAAGGATTGTGTTCATTGTTCGCGGACGCATAAAACGCAACCAAAGTCTCAGCAAAGGCATGGTAGCCTCTAGTATCCTCGAACCAGGAGGTTTTTTGGGTGATGAGCTACTTTCCTATTGCCTTCGCAGACCATTTATGGATAGGCTTCCAGCTTCCTCAGCCACATTTGTATGCCTTGAATCAGTAGAAGCCTTTGGTCTTGATGCTGATAACTTGAGGTACATCACTGATCACTTCCGCTACAAATTTGCCAATGAGAGACTAAAGAGAACTGCAAGATATTACTCATCCAATTGGAGAACATGGGCTGCTGTCAACATTCAATTAGCTTGGAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACTCCTGTAAGGGACAATGGAGGCACTGAGCGGAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATAAGGCCTCATGACCATCTTGAATGA 2124 0.4793 MPNFFSLPRLFYEERNPPSIYNNGGDSVTPVSITDDSPNSSAVECYACTQVGVPVFHSTSCDSCHQPQWEASAGSSLIPIQNQPGNNGPGVRVGFRTKSGPFGRVLDPRSKRVQVWNRALLIARGVALAIDPLFFYALSIGREGTPCLYMDGGLAAMVTVARTCVDAVHLFHLWLQFKLAYVSRESLVVGCGKLVWDARAIANHYLRSVKGFWFDAFVILPVPQAVFWLIVPKLIREEQIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTHGCNLSLSCSEEVCYQFLLPTGTTGNPCGGNSTVVRKPLCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRIVFIVRGRIKRNQSLSKGMVASSILEPGGFLGDELLSYCLRRPFMDRLPASSATFVCLESVEAFGLDADNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWRRYRQRTRGPVTPVRDNGGTERRLLQYAAMFMSIRPHDHLE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00074 707 SUPERFAMILY cAMP-binding domain-like 447 634 IPR018490 -
Gabi2596g00074 707 CDD CAP_ED 520 630 IPR000595 -
Gabi2596g00074 707 Gene3D Helix hairpin bin 446 511 - -
Gabi2596g00074 707 Pfam Ion transport protein 115 438 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi2596g00074 707 Gene3D Jelly Rolls 518 636 IPR014710 -
Gabi2596g00074 707 SUPERFAMILY Voltage-gated potassium channels 107 441 - -
Gabi2596g00074 707 Gene3D - 149 443 - -
Gabi2596g00074 707 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 98 673 - -
Gabi2596g00074 707 ProSiteProfiles cAMP/cGMP binding motif profile. 520 630 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00074 Gabi-Chr2596 757481 763705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00074 36 707 Ion Channels AT5G15410 79.209 0.0 1069
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00074 K05391 - gmx:100798823 1220.3