Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00049 ATGGAGCTATTGTATCTCTCCGTTCTGCTTCTGATTATTGTCACCATCTTTATCCTTTTTTACAGGCACATTTCTCCGTTCATGAACCCCAACTTGCCACCGGGAAGTATGGGGTATCCGGTGATCGGTGAGAGCCTTCAATTCCTGTCCACCGGGTGGAAAGGTCACCCAGAGAAGTTCATATATGAACGCATCAAGAAGTACTCTTCCCAAGTTTTCAAGACCTCAATCATTGGGGAACCCACAGTTATGTTCTGTGGTTCTGCATGCAACAAGTTCTTGTTTTCTAACGAGAACAAGCTCGTTGTGTCATGGTGGCCTGACAACGTTAACAAGATATTCCCAACGTCGCTTGAAACCAGTTCTAAGGAAGAAGCTATAAAAATGAGAAAGATATTCCCTCAGCTTCTGAACCCGCAAGCTCTCCAATGTTATATTGGCACTATGGACACCTTTGCCCAAAGGCACTTTGCTTCCGACTGGGAGAACAAGACGCATGTCACTGTATTTCCCTTGGCCAAGAGGTATACCTTCTGGTTGGCTTGCATTTTGTTCATGAGCGTTGAGGATCCAAACCACGTAGCAAAATTTGAAGAACCTTTCAATCTGTTGCCCGCGGGAATCATGTCCATACCCATAGACTTGCCAGGAACACCTTTCAACAGAGCAATAAAGGCGTCGAAGTTCATTAGGAAGGAGCTGTTGAAGATCATAAAGCAGAGGAAATTGGATTTGGCTGAAGGGAAGGCCTCAACAACACAAGACATATTGTCTCGCATGTTAATGTCATCCGATGAGAATGGACAATATATCGGTGAAGGTGATATTGCAGACAAGATTCTTGGCTTGTTGATTGCTGGCCATGACACTGCAAGTTCTGCATGCACTTCCATTGTCAAATACCTTGCCGATCCAATTATTTATCAACGTGTCTATCAGGAGCAAATGGAAATTGCAAAATCGAAATCTCGAGGTGAGTTATTGAATTGGGGTGACGTGGAGAAGATGAAATACTCGTGGAATGTTGCTTGTGAAGCAATGAGACTTGCCCCTCCACTCCCAGGAGCTTTCAGGGAAACTATCAATGATTTTATCTTCAATGGATTCTCAATTCCAAAAGGCTGGAAGTTATATTGGAGTGCAAACTCGACACATATGAATCCAGAGTGCTTTCCGGAGCCAGAGAAATTTGACCCGAGTCGATTCGAAGGAAAAGGATTAGCTCCTTACACTTATGTGCCATTCGGTGGAGGACCAAGGATGTGCCCCGGAAAAGAGTATGCACGATTGGAAATACTGGTTTTCATGCACAACTTAGTGAAGAGGTTTAAGTGGGATAAGATTATTCCTGATGAGAAGACTATCGTTAATCCCATGACTATTCCTGCCCAGGGCCTCCCTATTCGTCTTTATCCTCACCAACCTTGA 1428 0.4419 MELLYLSVLLLIIVTIFILFYRHISPFMNPNLPPGSMGYPVIGESLQFLSTGWKGHPEKFIYERIKKYSSQVFKTSIIGEPTVMFCGSACNKFLFSNENKLVVSWWPDNVNKIFPTSLETSSKEEAIKMRKIFPQLLNPQALQCYIGTMDTFAQRHFASDWENKTHVTVFPLAKRYTFWLACILFMSVEDPNHVAKFEEPFNLLPAGIMSIPIDLPGTPFNRAIKASKFIRKELLKIIKQRKLDLAEGKASTTQDILSRMLMSSDENGQYIGEGDIADKILGLLIAGHDTASSACTSIVKYLADPIIYQRVYQEQMEIAKSKSRGELLNWGDVEKMKYSWNVACEAMRLAPPLPGAFRETINDFIFNGFSIPKGWKLYWSANSTHMNPECFPEPEKFDPSRFEGKGLAPYTYVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWDKIIPDEKTIVNPMTIPAQGLPIRLYPHQP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00049 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Gabi2596g00049 475 Gene3D Cytochrome P450 25 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 SUPERFAMILY Cytochrome P450 26 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 PANTHER CYTOCHROME P450 26 32 461 - -
Gabi2596g00049 475 FunFam Taxadiene 5-alpha hydroxylase 23 473 - -
Gabi2596g00049 475 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 CDD CYP90-like 64 472 - -
Gabi2596g00049 475 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2596g00049 475 Pfam Cytochrome P450 33 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00049 Gabi-Chr2596 571033 575787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00049 22 382 Cytochrome P450 AT5G36110 58.082 2.31e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00049 K20667 - tcc:18589551 767.303