Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00037 ATGGCTGTGGAGGAGTCTGAGCCTGGGATACCGGAGCTAGAGAGGGAGGAGAACTTAATTGCTGCAGCAAGGCATATTGTGAAGGCATTAGGGTCAAATAATAACCTTACTAGTGATGCCAAGAAAATTCTGGCTGATCTTGGCACCCAGTTGTCCTCCATGAACATGACCAGTGAGAGGGAGGAGGGGAAGCAAGTGCAAGGGGAGGATAATGTTGATGAGGATGATGATGGTGAGGAGGAGGAGGAGGAGGGTGCTAGTGCTATTGAAAATCGACTTGGTGTGATTCAGGAGAAAATAATGAGATGGGAGGAAGATCAGTCCATGATTTGGGATTTGGGAACTGAAGAAGCATCTGAATATCTGAATGCAGCTAATGAAGCCCGTCGATTGATAGAGAAGTTGGAGAGTTTGCATTTGAATAAAGAGGACCAAGAGTATAAGTTCATGCAGAGGGCTTATAGTGTTCTTCAAACAGCAATGGCACGGCTTGAAGAAGAATTCAGGAACTTGCTTATCCAGAACAGGCAACCTTTTGAACCTGAATACGTGTCTTTTCGATCCAGTGAGGAAGATGCTGTTGATGAGAGCTCTATAGTCTCTTTAGGTGATGAATCAGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCCTCTGAGGAGCATATCATTGATTTAGTTCATCCAGCTGTGATACCAGATCTTAGGTGTATTGCAAACTTGCTGTTTGCTTCTAATTATGTCCAGGAATGTTCCCATGCTTATACCATTGTCCGGAGAGATGCCTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGTATTGAGGATGTCTTGAAAATGGAGTGGGTTACTTTGAATTCAAAAATCAAAAGATGGATTTGGGCTGTGAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGGTGGCTTAGTGACCAGATTTTTGGGGAGGGTGAGCCTGTTAGTCTAGCTTGTTTTGTTGATGCATCTAAGGCTTCAATATTGCAGCTTCTGAATTTTGGTGAAGCCATGTCCATTGGCCCCCACCAGCCTGAGAAATTGATTCGAATTCTTGACATGTATGAGGTTCTATCAGACCTTATGCCAGATATCAATGCTTTGTATTCCGATGAGGTTGGTTCATCTGTTAAAATTGAATGTCATGAGGTTCTGAAGAGATTAGGCGATTGTGTGAGGGCTACATTTCTTGAATTTGAAAATGCCATTGCATCAAATGCATCATCAAACCCTTTTGTAGGTGGTGGGGTACATCCTTTGACCAGATATGTTATGAATTATCTTAGGACTCTTACTGACTACAGCGAAACACTTAATCTGCTTCTGAAGGACCAAGAAGAGGATGCCATCTCGCTGTCACCTGACATGAGCCCCGATACAGAAGAAGATAGCAGAAGCCAAGGATCTCCAAGTAGAGTTTCCTCAATGACCCTCCACTTCCGATCAGTTGCTTCAATCTTGGAATGCAACCTTGAGGAGAAGTCCAAGTTATACAAAGAAGCTTCTTTGCAGCACTTGTTCTTAATGAACAACCTACATTATATGGCTGAAAAGGTTAAGGGGTGTGAGCTTAGACTCATATATGGAGATGAATGGATTCGAAAGCGCAACTGGAAGTTTCAGCAGCATGCAATGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTTAGGGATGAGGGAATTCATGTTCCAGGTACAAATTCTATCTCAAGAAGTCTTCTTAGGGAGAGGTTACGAAGCTTCTACCTTGGCTTTGAAGATGTCTACAGAATCCAGACAGCTTGGATTATCCCAGATGTTCAACTTCGTGACGATTTGCGGATTTCTTTATCTGTCAAAGTAATCCAAGCTTATAGGACATTTGTTGGAAGGAATAATTGTCACATAAGTGACAAACTCATTAAATACACAGCTGATGATTTGGAAAACTACCTTTTGGATTTCTTTGAGGGATCTCAAAAGTGGTTGCAAAATCCTAGGAGGTGA 2025 0.4227 MAVEESEPGIPELEREENLIAAARHIVKALGSNNNLTSDAKKILADLGTQLSSMNMTSEREEGKQVQGEDNVDEDDDGEEEEEEGASAIENRLGVIQEKIMRWEEDQSMIWDLGTEEASEYLNAANEARRLIEKLESLHLNKEDQEYKFMQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSSEEDAVDESSIVSLGDESVEESLQRDSVSRASEEHIIDLVHPAVIPDLRCIANLLFASNYVQECSHAYTIVRRDALDECLFILEMERLSIEDVLKMEWVTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVSLACFVDASKASILQLLNFGEAMSIGPHQPEKLIRILDMYEVLSDLMPDINALYSDEVGSSVKIECHEVLKRLGDCVRATFLEFENAIASNASSNPFVGGGVHPLTRYVMNYLRTLTDYSETLNLLLKDQEEDAISLSPDMSPDTEEDSRSQGSPSRVSSMTLHFRSVASILECNLEEKSKLYKEASLQHLFLMNNLHYMAEKVKGCELRLIYGDEWIRKRNWKFQQHAMKYERASWSSILNLLRDEGIHVPGTNSISRSLLRERLRSFYLGFEDVYRIQTAWIIPDVQLRDDLRISLSVKVIQAYRTFVGRNNCHISDKLIKYTADDLENYLLDFFEGSQKWLQNPRR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00037 674 Gene3D Exocyst complex component Exo70 99 671 - -
Gabi2596g00037 674 MobiDBLite consensus disorder prediction 68 86 - -
Gabi2596g00037 674 SUPERFAMILY Cullin repeat-like 107 663 IPR016159 -
Gabi2596g00037 674 Pfam Exo70 exocyst complex subunit 294 659 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi2596g00037 674 Coils Coil 118 145 - -
Gabi2596g00037 674 MobiDBLite consensus disorder prediction 53 87 - -
Gabi2596g00037 674 MobiDBLite consensus disorder prediction 461 484 - -
Gabi2596g00037 674 Coils Coil 147 174 - -
Gabi2596g00037 674 PANTHER EXOCYST COMPLEX PROTEIN EXO70 82 664 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00037 Gabi-Chr2596 449423 452307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00037 12 674 EXO70 exocyst subunit family AT3G29400 48.968 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00037 K07195 - gmx:100799102 1155.58