Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2596g00036 | ATGGTCTTACTTAGAGCAAGTTATTATGGCACAGTTAAAGCAGAAGAAGGAAGAGAAGAAGCTGATAGGATTTTGGAACTCCCAGGGCAACCAAAGGTGTCGTTTCAGCAGTTCTCTGGCTATGTTACTGTCAATAAGGTTGATGGTAGAGCACTCTTTTACTGGCTCACTGAAGCTTCCCAAAACCCTCTCACCAAACCCCTTGTCATTTGGCTCAATGGAGGTCCAGGTTGTTCATCAGTGGCATATGGAGCATCCGAAGAGATTGGGCCATTTAGAATAAATAAAACAGCTTCTGGGCTATACATTAACAAGTTCTCATGGAACACAGTGACCAATCTCTTATTCTTGGAAGCTCCGGCCGGAGTTGGCTTCTCCTACACCAACCGCTCCTCCGACCTCCTTGACACTGGCGACCGCCGCACTGCCGAAGACTCTCTGGAATTTGTAATCCAATGGCTAGAACGATTCCCACGTTATAAGAATCGGGAAATTTATATCACTGGAGAGAGCTATGCAGGCCATTATGTCCCTCAATTAGCTAGGCAAATCTTGACCTATAACTCAAAAACCAAGTACCCCATTAATCTCAAAGGAATAATGGTTGGAAATGCAGTCACAGACAACTATTATGATAACTTGGGCACAGTGACTTATTGGTGGAGCCATGCAATGATCTCCGACCAGACTTACCGGCAACTCATTAACACTTGTGATTTTCACCGGCAGAAGGAATCCGATGAGTGTGAGTCTCTATATAGCTACGCCATGGATCAAGAATTTGGCAACATTGATCAATACAACATCTATGCACCTCCATGCAACAATTCAGATGGCAGCTCAAAATTTATTTATTCTCAGGCTTTCAGAAAATGGTCTGGTTATGATCCATGTACGGAAAAGTATGCAGAGATTTACTACAATAGGCCAGATGTTCAGAAAGCACTCCATGCTAACACAACCGGCATTTCTTATAAGTGGACTGCTTGCAGTGAGATTTTGAATCGAAACTGGAATGATACAGATGTATCTGTTCTTCCAATTTATAGAGAGTTGATAGCTCATGGAACAAGAGTTTGGGTGTTCAGTGGGGATGTGGACTCAGTGGTGCCGGTTACAGCTACTAGATATGCCCTTGCACAGCTTAAGTTGGCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAATCAAGTTGGAGGTTGGACAGAGGTGTATGAAGGGTTAACATTTGCCACGGTGAGAGGAGCAGGCCATGAAGTCCCACTATTCAAGCCCAGAGCAGCTCTTCAGTTATTCAAATCATTTCTTGCAGGAAAGCCTCTCCCTAAATCCTAA | 1338 | 0.4365 | MVLLRASYYGTVKAEEGREEADRILELPGQPKVSFQQFSGYVTVNKVDGRALFYWLTEASQNPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYINKFSWNTVTNLLFLEAPAGVGFSYTNRSSDLLDTGDRRTAEDSLEFVIQWLERFPRYKNREIYITGESYAGHYVPQLARQILTYNSKTKYPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLINTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSKFIYSQAFRKWSGYDPCTEKYAEIYYNRPDVQKALHANTTGISYKWTACSEILNRNWNDTDVSVLPIYRELIAHGTRVWVFSGDVDSVVPVTATRYALAQLKLATKIPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKS | 445 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2596g00036 | 445 | SUPERFAMILY | alpha/beta-Hydrolases | 26 | 443 | IPR029058 | - | |
Gabi2596g00036 | 445 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 153 | 178 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2596g00036 | 445 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 409 | 422 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2596g00036 | 445 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 104 | 116 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2596g00036 | 445 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 117 | 127 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2596g00036 | 445 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 167 | 174 | IPR018202 | GO:0004185 | |
Gabi2596g00036 | 445 | Gene3D | - | 298 | 335 | - | - | |
Gabi2596g00036 | 445 | Gene3D | - | 345 | 439 | - | - | |
Gabi2596g00036 | 445 | FunFam | Carboxypeptidase | 18 | 276 | - | - | |
Gabi2596g00036 | 445 | Pfam | Serine carboxypeptidase | 29 | 438 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2596g00036 | 445 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 409 | 426 | IPR033124 | GO:0004185 | |
Gabi2596g00036 | 445 | FunFam | Carboxypeptidase | 345 | 439 | - | - | |
Gabi2596g00036 | 445 | FunFam | Carboxypeptidase | 294 | 442 | - | - | |
Gabi2596g00036 | 445 | Gene3D | alpha/beta hydrolase | 18 | 276 | IPR029058 | - | |
Gabi2596g00036 | 445 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 25 | 426 | IPR001563 | GO:0004185|GO:0006508 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2596g00036 | Gabi-Chr2596 | 442142 | 446445 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2596g00036 | 303 | 442 | Calmodulin-binding Proteins | AT2G22960 | 31.206 | 1.93e-16 | 75.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2596g00036 | K16297 | - | gmx:100807680 | 836.639 |