Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00029 ATGGCTACAATCAAAGGCCGTAAAGCAAATGAGATCTTCCAAGGTCAAGCTCTCTTGTATAGACACATGTATGCCTTCTTAGACTCTATGTGTCTTAAATGGACCGTTGAGCTAGCCATACCAGACATAATCCACAACCATGGTCAACCCATAACTCTTCCTGAGTTGTTGTCAATTTTGCAAGTTCCACCAACTAAAGTTTGTGGCGTGCAGCGTCTCATGCGCTACTTGACTCACAATGGAATCTTTGAGATAGTAAAAATCCATGACAAGTACAACCAAGAAGAGAAGGAAGCATATGCTCTCACTGTTGCATCAGAGCTACTTGTCAAAGGCACTGACCATTGTTTAGCTCCAATGGTTGAGTGTATTCTTGACCCAACTCTGTCAAGTTCAGCCCATCAGTTGAAGAAATGGATTTATGAGGAAGATCTCACACTATTTGATGTCTCCTTGGGGTCTGGATTTTGGGACTTTCTTGATAAAAACCCTGCATATAATAGTTCCTTCAATGAGGCAATGGCTAGTGATTCTCGAATTTTAAACTTGGCATTAAGAGATTACAATTTGGTCTTTGAGGGGCTGGAATTTATTGTGGACGTAGGAGGTGGAACTGGAACCACAGCCAAGCTTATCTCTGAGACATTTCCATATTTGAAGTTCATAGTGTTTGACCGTCCACAGGTTGTAGAGAATTTGCCCGGAAGCAACAATTTGACTTATGTTGGTGGGGACATGTTCCAATCTATTCCTAAGGCTGATGCAGTTCTACTCAAGTGGATTTTACATAATTGGACTGATAACGATTGCAGAAAGATATTGGAAAAATGTAAAGAAGCTATTTCAAATGATGGCAAAAGAGGAAAAGTAATTCTCATAGATATTGTGATAAATGAAAAGCGAGATGAACATGAAATTACTCAAACAAAGCTTCTTATGGATGTAGCGATGGCGTGTCTTAATGGAAAAGAGAGAACTGAAGAAGAATGGAAGAAACTCTTCATGGAAGCAGGCTTCCAAGACTACAAAATATCTCCTTTGACCGGATATTTGTCTGTTATTGAGGTCTATCCTTAA 1077 0.3974 MATIKGRKANEIFQGQALLYRHMYAFLDSMCLKWTVELAIPDIIHNHGQPITLPELLSILQVPPTKVCGVQRLMRYLTHNGIFEIVKIHDKYNQEEKEAYALTVASELLVKGTDHCLAPMVECILDPTLSSSAHQLKKWIYEEDLTLFDVSLGSGFWDFLDKNPAYNSSFNEAMASDSRILNLALRDYNLVFEGLEFIVDVGGGTGTTAKLISETFPYLKFIVFDRPQVVENLPGSNNLTYVGGDMFQSIPKADAVLLKWILHNWTDNDCRKILEKCKEAISNDGKRGKVILIDIVINEKRDEHEITQTKLLMDVAMACLNGKERTEEEWKKLFMEAGFQDYKISPLTGYLSVIEVYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00029 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Gabi2596g00029 358 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Gabi2596g00029 358 PANTHER O-METHYLTRANSFERASE 14 343 IPR016461 GO:0008168
Gabi2596g00029 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Gabi2596g00029 358 Gene3D - 2 109 IPR036388 -
Gabi2596g00029 358 FunFam O-methyltransferase ZRP4 111 358 - -
Gabi2596g00029 358 CDD AdoMet_MTases 198 297 - -
Gabi2596g00029 358 Gene3D Vaccinia Virus protein VP39 110 358 IPR029063 -
Gabi2596g00029 358 Pfam O-methyltransferase domain 135 340 IPR001077 GO:0008171
Gabi2596g00029 358 FunFam Coniferyl alcohol 9-O-methyltransferase 2 109 - -
Gabi2596g00029 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 358 IPR016461 GO:0008168
Gabi2596g00029 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00029 Gabi-Chr2596 364739 366319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00029 30 344 Monolignol Biosynthesis Gene Families AT5G54160 33.542 1.89e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00029 K22588 K13262 gmx:100813225 566.614