Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00028 ATGGCTTCTCCCAACAATTCTATCAAAATTCATCAACACTGTTTTGTTGCTCCTTCATCTTCAACCAACTTGTCTCTCCCTCTCACCTTCTTTGACCTCCTTCGCCTAAGGTACTATCCAGTTGAGCGCATCTTCTTCTACTCCCTTCCTCTTCCTCATTCAAACCCATCCTTTTTCTATGAAAAAGTGGTTCCAAAGCTCAAAACCTCACTCTCTCTTATCCTCCAACACTTCCTCCCTTTAGCTGGTAACATCGTTTGGCCTTCTGATTCCCAGAAACCCTTCATCCAATATAACCCTGGTGATGGTGTTTCCTTGGTCCTGGCAGAGTATGATGCAGATTTCAATCTTGTATTGGACAATTCACCCCGTGAAGCCATAGAATCTCGTTCTTTTGTACCCCATTTGGAATCATCAGATTCTCTTGCATCTGTTATCTCCCTACAGATAACTCTGTTTCCAAACAGTGGATTTTGCATCGGCATCAGCACCCACCATGCTGTTCTTGATGGAAAATCTTCAACTATGTTCACCACGGCCTGGGCTTCTCTATGTAAATCAGGTGAAGAATCACCATCTTTGGTGCGAGGGTTAGAGCCCTTCTTTGACAGGGAAGTCATCAAAGATCCAAATGGCCTTGACTTTTTGTTCATAAACAATTCTGTTCAAGAAACCAAAAGGGATAAACAGAAATTTGCTTTTGCATTTTCTATGGATTGCAGGGCTCGGTTAGAGCCTCCAATCCCTGAGAACTATGTTGGCAATTGTGTATCTTCTCATATAGTGGATACACAGCAAGATGACTTTATAAAAGAAGATGGGGTGGTCATTGTTGCCGAGAAGATTTACAGTAAATTAAAAATGTTGGATAAGAGAGCTCTTGATGGAGCTGAGACATTGTCTCTGAGACTTTTGTCTATGTTAAGTGAGGGAGTTGAAATAATTGGAGTTTCAGGGTCAACACGGTTTGGAGTTTATGAGACAGACTTTGGTTGGGGAAGGCCTGCTAAGGTGGAGATAACATCACTCGATAGAGGTTTAAACATTGGCATAGCTGAGAGCAAGGATGGGAAGAGTGGTGTTGAAGTGGGACTTGTTTTGAATAAGCATGCGATGGATCTTTTTTTCAAGCATTTTCTTCTAACAACACTTCCTCTGTTTCACATGGCTCCTCACAAGAACAACAACAACAACATCAAAATTCATGAGCACAACTATGTTGCTCCTCCATCATCTGCAACCGAAACATCTATTCTTCTCACTGTCTTTGACATGTTATGGCTCAGGTTCCATCCAGTTGAGCGTGTCTTCTTCTACTCCCTTAACGATTCACACTCATCAGACCCATCTTTTTTGTTTGACAAAGTGGTTCCAAGACTCAAAACCTCACTCTCTCTCACCCTCCAACACTTTCTCCCTCTAGCTGGCAACATCGTTTGGCCTTCTGATTCGGAAAAACCCATCATCAAATACACCCCCGGTGATGGTGTTTCAATGGTCATTGCAGAGTCTGATGCTGACTTCAACCATATCATGGATAATTCACCCCATGAATTGGTAAAGTCTCGTTCTTTAGTACCCCACTTGGAATCATCAGATTCTCTTGCTTCTGTTATCTCTCTACAAATAACTCTGTTTCCAAACAGTGGATTTAGCATCGGTATCAGCACCCACCATGCTGTTCTTGATGGGAAATCTTCAACTATGTTCATCAAGGCATGGGCTTCTCTATGTCAAAACTGTGAAGAATCACCATCTCTGGTGCAAGAGTTAGTGCCCTTCTTAAACAGGGAAGTCATCAAAGATCCAAGTGAACTTAGCATCACGTTCACAAATAATTGGACAGAAACCTTAACCGAAATGTTCCCTAAAGATAACAGTGATGGGCGATGCTTGAAGATTCTACCATTCCAACCAAAACTGGAGGACACAGTTCGAGCAACGTTCGAGCTCACACGAGGAGATTTGGAGAAGCTAAAGGCAGGGGTATTATCCAAGTGGGACATGGTGGAAGAAGGAGCACAATTATCAAAGCCACATACTTTATCATCCTTTGTTCTCACATGTGCATATGTTTCTGTCTGCATTGCTAAAGCTATTCAAGGAGTTGAAAAGGACAAAGATAAATTCGCTTTTGCATTCGCGGTGGATTGCAGGGCAAGATTAGAGCCTCCAATCCCTGAGAACTATTTTGGTAACTGTGTGTGGGGTCATTTCATTGATACACAACCAAGGGATTATACAAAGGAAGATGGGTTCGTCATTGTTGCTAAGTGCATTCATAATAAAATAAAAAGCTTTGATAAGGGAGTTTTTGGAGGAACCGGGGATGCTTTTTCTAGATTGAAGGCTTTGAAAAGTGAGGGAGTTGAATTGATGGGACTAGCAGGGTCAAATCGATTTGGTGTTTATGGTACTGATTTTGGTTGGGGAAGGCCTGCAAAGGTGGAGATAATATCAGTGGATAGAGGTTTAACCTTTGGCTTGGCAGAGAGTAAGGATGGGAAATGTGGGGTTGAAGTTGGGCTTGTTCTGAATAAAAATGTTATGGAACACTTCAACACTTTATTTCATGGAGGACTACGCGTTGATTGA 2595 0.4212 MASPNNSIKIHQHCFVAPSSSTNLSLPLTFFDLLRLRYYPVERIFFYSLPLPHSNPSFFYEKVVPKLKTSLSLILQHFLPLAGNIVWPSDSQKPFIQYNPGDGVSLVLAEYDADFNLVLDNSPREAIESRSFVPHLESSDSLASVISLQITLFPNSGFCIGISTHHAVLDGKSSTMFTTAWASLCKSGEESPSLVRGLEPFFDREVIKDPNGLDFLFINNSVQETKRDKQKFAFAFSMDCRARLEPPIPENYVGNCVSSHIVDTQQDDFIKEDGVVIVAEKIYSKLKMLDKRALDGAETLSLRLLSMLSEGVEIIGVSGSTRFGVYETDFGWGRPAKVEITSLDRGLNIGIAESKDGKSGVEVGLVLNKHAMDLFFKHFLLTTLPLFHMAPHKNNNNNIKIHEHNYVAPPSSATETSILLTVFDMLWLRFHPVERVFFYSLNDSHSSDPSFLFDKVVPRLKTSLSLTLQHFLPLAGNIVWPSDSEKPIIKYTPGDGVSMVIAESDADFNHIMDNSPHELVKSRSLVPHLESSDSLASVISLQITLFPNSGFSIGISTHHAVLDGKSSTMFIKAWASLCQNCEESPSLVQELVPFLNREVIKDPSELSITFTNNWTETLTEMFPKDNSDGRCLKILPFQPKLEDTVRATFELTRGDLEKLKAGVLSKWDMVEEGAQLSKPHTLSSFVLTCAYVSVCIAKAIQGVEKDKDKFAFAFAVDCRARLEPPIPENYFGNCVWGHFIDTQPRDYTKEDGFVIVAKCIHNKIKSFDKGVFGGTGDAFSRLKALKSEGVELMGLAGSNRFGVYGTDFGWGRPAKVEIISVDRGLTFGLAESKDGKCGVEVGLVLNKNVMEHFNTLFHGGLRVD 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00028 864 Gene3D - 219 382 IPR023213 -
Gabi2596g00028 864 Gene3D - 641 863 IPR023213 -
Gabi2596g00028 864 Gene3D - 398 625 IPR023213 -
Gabi2596g00028 864 Pfam Transferase family 229 379 - -
Gabi2596g00028 864 Pfam Transferase family 9 210 - -
Gabi2596g00028 864 Pfam Transferase family 399 855 - -
Gabi2596g00028 864 PANTHER - 399 862 - -
Gabi2596g00028 864 Gene3D - 4 218 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00028 Gabi-Chr2596 324382 362630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00028 399 843 Monolignol Biosynthesis Gene Families AT5G48930 25.546 6.36e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00028 - - tpra:123889238 813.913