Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00027 ATGATAATCGTAGAAGTTTTGAGAGTAGCACCAGCTTCGGGATCAGAAAACTTACCTACTCAAACATTACTTCTTCCTCTAACCTTCTTTGACCTACTCTGGTTAAGGTTACCTCCTGTTGAACGCGTTTTCTTCTATGAATTCCCTCATCCAACCACTCTCTTCTTCAATACCCTTCTTCCCAAACTCAAACGCTCTCTTTCTCTTGCACTTGGCTACTTCTTCCCTCTTGCGGGCCACCTCACTTGGCCCCTTGACTCCAACAAACCCATCATCAAGTACAACACAGGTGACACTGTTTCCCTCACTGTAGCTGAATCTGATGCTGATTTCAACTATCTAGCAGGTTCAAACCTTTGTGAAGCGACACAAAGTCACCATCTTGTACCCCACTTGATCATATCCCATGAACAAGCTACTGTGTTAGCCCTTCAGGTCACTCTATTTCCAAACTCTGGATTCTCCATTGGAATCACCTCTCACCATGCTGTTCTAGATGGCAAGACTTCAACTTCGTTTATCAAATCTTGGGCTTATCTATGCAGCAGGCTAGGAGAATCAGAATCAGAATCAGAATCACCCTTTTGTTTGCCACCTGAACTGAGTCCTTTCTATGATAGGGAAATGATCAAAGACAATAATGAAATAGAGGCTAAATATGTAAGTAATTGGTTAAAGCAAGGTGGACCCAACAACAGAAGCTTCATGGTTTGGGATCTCCAACTTCCAGAAGAGGCAATTAGAGGCTTGTTTCAATTGTCTCGCTCAGATATTGAAAAGCTCAAACAATCTGTTGTGTCAAAACAGAAAGGGAATCTTCACTTGTCAACTTTTGTATTATCTATAGCGTATGCATGGGTTTGCAGGGTGAAAGCTGAGGAAATTCAAAACAGAAGAGTTATTATGGCTCTGAATATTGATTGCAGGTCTCGCTTAGAACCACCTCTTCCTCCAACATATTTTGGAAATTGCATTGGGGCAAGACTTACAGTTTGTGAAACGAGAGAATTATTGGGGGAAGATGGACTAATTGTGGCTGTGGAAGCACTGAGTGCAGCTTTGGGAACTTTGAAGGATGGAGTGCTGAGTGGAGCAGAAAATTGGTCATCATGGTTGATTGATGGTTTTGCCACTGATGTGAAGACAATTGGTGCTGCTGGGTCACCCAAGTTCGATGTTTACAATTGTGATTTTGGTTGGGGAAGGCCAAAGAAGGTGGAGATGGCGTCTATAGATAGAACTGGAGCATTTTGTCTCTCTGATAGCAAAAATGGTGATGGAGTTGAGATAAGTTTGGTGTCCAAGAAAGAAGCAATGGAGGCCTTTGCTTCTCTCTTTGTTAAAGGACTTCTTCAATCTTGA 1362 0.4236 MIIVEVLRVAPASGSENLPTQTLLLPLTFFDLLWLRLPPVERVFFYEFPHPTTLFFNTLLPKLKRSLSLALGYFFPLAGHLTWPLDSNKPIIKYNTGDTVSLTVAESDADFNYLAGSNLCEATQSHHLVPHLIISHEQATVLALQVTLFPNSGFSIGITSHHAVLDGKTSTSFIKSWAYLCSRLGESESESESPFCLPPELSPFYDREMIKDNNEIEAKYVSNWLKQGGPNNRSFMVWDLQLPEEAIRGLFQLSRSDIEKLKQSVVSKQKGNLHLSTFVLSIAYAWVCRVKAEEIQNRRVIMALNIDCRSRLEPPLPPTYFGNCIGARLTVCETRELLGEDGLIVAVEALSAALGTLKDGVLSGAENWSSWLIDGFATDVKTIGAAGSPKFDVYNCDFGWGRPKKVEMASIDRTGAFCLSDSKNGDGVEISLVSKKEAMEAFASLFVKGLLQS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00027 453 PANTHER - 3 450 - -
Gabi2596g00027 453 Gene3D - 2 235 IPR023213 -
Gabi2596g00027 453 Pfam Transferase family 19 444 - -
Gabi2596g00027 453 Gene3D - 242 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00027 Gabi-Chr2596 314170 315531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00027 43 442 Monolignol Biosynthesis Gene Families AT5G48930 25.362 1.75e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00027 - - gmx:102660160 655.595