Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00026 ATGGCTCCTCACAACAACAACAACAACAACAACAACAACAACATCAAAATTCATGAGCACAGCTATGTTGCTCCTCCATCATCTGCAACCGAAACATCTATTCCTCTCACTGTCTTTGACATGTCATGGCTCAGGTACCATCCACTTGAGTGTGTCTTCTTCTACTCCCTTAACGATTCACACTCGTCAGACCCATCTTTTTTCTTTGACAAAGTAGTTCCAAGACTCAAAACCTCACTCTCTCTCACCCTCCAACACTTCCTCCCTCTAGCTGGCAACATCGTTTGGCCTTCTGATTCGGAAAAACCCATCATCAAATACACCCCCGGTGAAGGTGTTTCAATGGTCATTGCAGAGTCTGATGCTGACTTCAACCATATCATGGATAATTCACCCCATGAAGTGGTAAAGTCTCGTTCTTTAGTACCCCACTTGGAATCATCAGATTCTCTTGCTTCTGTTATCTCTCTACAGATAACTTTGTTTCCAAACAGTGGATTTAGCATCGGTATCAGCACCCACCATGCTGTTCTTGATGGGAAATCTACAACTATGTTCATCAAGGCATGGGCTTCTCTATGTCAAAGCTGTGAAGAATCACCATCTCTGGTGCCAGAGTTAGTGCCCTTCTATAACAGGGAAGTCATCAAAGATCCAAGTGAACTTAGCATCACGTCCACAAATAAAGCTATTCAAGGAGTTGAAAAGGACAAAGATAAATTCGCTTTTTCATTCGGGGTGGATTGCAGGGCAAGATTAGAGCCTCCAATCCCTGAGAACTATTTTGGTAACTGTGTGTGGGGTCATTTCATTGATACACAGCCAAAGGATTATACAAAGGAAGATGGGGTCATCATTGTTGCTAAGTGCATTCATAATAAAATAAAAAGCTTTGATAAGGGGGTTTTTAGAGGAACTGGGGGTGTGTTTTCTAGAGTGAAGGCTTTGCAAAGTGAGGGAGCTGAATTGATGGGACTAACAGGGTCAAATCGATTTGGTGATTATCGTACTGATTTTGGTTGGGGAAGGCCTGCAAAGGTGGAGATAATATCAGTGGATAGAGGTTTAATCTTTGGCTTGGTAGAGAGTAAGGATGGGAAAGGTGGGGTTGAAGTTGGGCTTGTTCTGAATAAAAATGTTATGGAACACTTCACTAAGCATTTTCTTCTAACACCACTTCCTCTGTTTCCCATGGCTCCTCACAAGAACAACAACAACATCAAAATTCATAAGCACATCTATGTTGGTCCTCCATCATCTGCAACCGAAACATCTATTCCTCTCACTGTCTTTGACATGTTATGGCTCAGGTTCCATCCACTTGAGTGTGTCTTCTTCTACTCCCTTAACGATTCACACTCATCAGACCCATCTTTTTTCATTAACAAAATGGTTCCAAGACTCAAAACCTCACTCTCTCTCACCCTCCAACACTTCCTCCCTCTAGCTGGCAACATCGTTTGGCCTTCTGATTCGGAAAAACCCATTGTCAAATACACCCCCGGTGATGGTGTTTCAATGGTCATTGCAGAGTCTGATGCTGACTTCAACCATATCATGGATAATTCACCCCAGGAAGTGGTAAAGTCTCGTTCTTTAGTACCCCACTTGGAATCATCAGATTCTCTTGCTTCTGTTATCTCTCTACAGATAACTCTGTTTCCAAACAGTGGATTTAGCATCGGTATCAGCACCCACCATGCTGTTCTTGATGGGAAATCTTCAACTATGTTCATCAAGGCATGGGCTTCTCTATGTCAAAACTGTGAAGGATCACCATCTCTGGTGCCAGAGTTAGTGCCCTTCTTTAACAGGGAAGTCATCAAGGATCCAAGTGAACTTAGCATCATGTTCACAAAAAATTGGAGAGAATCTGTGTCCAAAATATTCCCTGAAGAAAACAGTGATGGGCGATGCGTGAAGATTCTACCATTCCAACCAAAACTGGAGGACACAGTTCGAGCAACGTTCGAGCTCACACAAGGAGATTTGGAGAAGATAAAGGCAATGGTATTATCCAAGTGGGACACGGTGGAAGAAGGAGCACAATTATCAAAGCCACATACTTTATCATCCTTTGTTCTCACATGTGCTTATGTTTCTGTCTGCATTGCTAAAGCTATTCAAGGAGTTGAAAAGGACAAAGATAAATTCGCTTTTGCATTCCCGGTGGATTGCAGGGCAAGATTAGAGCCTCCAATTCCTGAGAACTATTTTGGTAACTGTGTGTGGGGTCATTTCATTGATACACATCCAAGGGATTATACAAAGGAAGATGGGGTCGTCATTGTTGCTAAGTGCATTCATAATAAAATAAAAAGCTTTAATAAGGGAGTTTTTGGAGGAACCGGGGGTGGGTTTTCTAGAGTGAAAGCTTTGCAAAGTGAGGGAGCTGAAATAATGGGACTAGCAGGGTCAAATCAATTTGGTGTTTATCGCACTGATTTTGGTTGGGGAAGGCCTGCAAAGGTGGAGATAATATCAACGGATACAGGAGGTTTAAGCTTTGGCTTGGCAGAGAGTAAGGATGGGAAATGTGGGGTTGAAGTTGGGCTTGTTCTCAATAAAAATGTTATGGAACTCTTCAATACTTTATTTCATGGAGGACTACGCGTTGATTGA 2622 0.4245 MAPHNNNNNNNNNNIKIHEHSYVAPPSSATETSIPLTVFDMSWLRYHPLECVFFYSLNDSHSSDPSFFFDKVVPRLKTSLSLTLQHFLPLAGNIVWPSDSEKPIIKYTPGEGVSMVIAESDADFNHIMDNSPHEVVKSRSLVPHLESSDSLASVISLQITLFPNSGFSIGISTHHAVLDGKSTTMFIKAWASLCQSCEESPSLVPELVPFYNREVIKDPSELSITSTNKAIQGVEKDKDKFAFSFGVDCRARLEPPIPENYFGNCVWGHFIDTQPKDYTKEDGVIIVAKCIHNKIKSFDKGVFRGTGGVFSRVKALQSEGAELMGLTGSNRFGDYRTDFGWGRPAKVEIISVDRGLIFGLVESKDGKGGVEVGLVLNKNVMEHFTKHFLLTPLPLFPMAPHKNNNNIKIHKHIYVGPPSSATETSIPLTVFDMLWLRFHPLECVFFYSLNDSHSSDPSFFINKMVPRLKTSLSLTLQHFLPLAGNIVWPSDSEKPIVKYTPGDGVSMVIAESDADFNHIMDNSPQEVVKSRSLVPHLESSDSLASVISLQITLFPNSGFSIGISTHHAVLDGKSSTMFIKAWASLCQNCEGSPSLVPELVPFFNREVIKDPSELSIMFTKNWRESVSKIFPEENSDGRCVKILPFQPKLEDTVRATFELTQGDLEKIKAMVLSKWDTVEEGAQLSKPHTLSSFVLTCAYVSVCIAKAIQGVEKDKDKFAFAFPVDCRARLEPPIPENYFGNCVWGHFIDTHPRDYTKEDGVVIVAKCIHNKIKSFNKGVFGGTGGGFSRVKALQSEGAEIMGLAGSNQFGVYRTDFGWGRPAKVEIISTDTGGLSFGLAESKDGKCGVEVGLVLNKNVMELFNTLFHGGLRVD 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00026 873 Gene3D - 649 872 IPR023213 -
Gabi2596g00026 873 Gene3D - 227 390 IPR023213 -
Gabi2596g00026 873 Pfam Transferase family 407 863 - -
Gabi2596g00026 873 Pfam Transferase family 241 388 - -
Gabi2596g00026 873 Pfam Transferase family 15 197 - -
Gabi2596g00026 873 Gene3D - 407 631 IPR023213 -
Gabi2596g00026 873 Gene3D - 10 226 IPR023213 -
Gabi2596g00026 873 PANTHER - 407 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00026 Gabi-Chr2596 250289 282379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00026 407 862 Monolignol Biosynthesis Gene Families AT5G48930 23.718 6.85e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00026 - - tpra:123889238 785.023