Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00024 ATGATTAAGAGCCCAAAGAAAGCAGATTTTGGATTAAAACAGGAGGGTCATTCAATTGATGAAAAAGAAAAGGCATCATCAAGCTCAGCACAATGGCCAAGGTTGAAGGATCCAAGGATTGTTAGAGTATCAAGAGCCTTTGGAGGAAAAGACAGACATAGTAAGGTTTGCACAATAAGAGGATTAAGAGACAGGCGTGTAAGGCTATCAGTACCAACTGCAATTCAACTATATGATCTTCAAGATAAGCTAGGGCTTAATCAACCAAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCTAAGCATGAAATTGATGAACTTCCACCACTACCAAATATTCCACCAGGGAACTTCACCTTTAGTTCTCCATCTGCTGTTACTTCAAATGAAGCTAATAGCATATCTCAGCCTAATGAACCACTGTTTAATATCAATAGGAGCATTGATTGGGAAGGTTCAAGCCAAAATTCTATTTGGAAATTAAAGCATAAAGAAGTTTCAGGTGAAATGCTTGCTGATAAAGCACACTGGATGAATAGAAGTGAAGAGGATAAGCAAGGAAACAATGAAGGTCCTGCAGGTGCACATGTTTTGCCAAATCATCCTTCATTCCTAGACTTGCTAAATACTGTGCCACTTGGTTATCAATGGGAGCCTTCTGGTGATGTTTCTCATCACTTGGGAAACCATGGATTTTTAAGCCAAACAGATACACACAGCATTAATGTTGTACCTTTCCCATCAACATTGTCTTTATCAACTGGGAATTCTCAAATTGTGGTGTGTCCTCCAGGAGTAACACAGGCATATTTCCCTTCACATGTTGCAGCAATGGACATGGATCCTAGACAAATCAACCACTATCAGATGTTGAGTTCAAGTTCTCAAAATCCATCCTTCAGCTTGGCCATGATGACTCCAAAACTTTTCCATTCACCCAACAACAGTGAAAGCCCATCTCACAAAGACCAAGATTTCCCTTCCAAGTGA 990 0.401 MIKSPKKADFGLKQEGHSIDEKEKASSSSAQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLNAAKHEIDELPPLPNIPPGNFTFSSPSAVTSNEANSISQPNEPLFNINRSIDWEGSSQNSIWKLKHKEVSGEMLADKAHWMNRSEEDKQGNNEGPAGAHVLPNHPSFLDLLNTVPLGYQWEPSGDVSHHLGNHGFLSQTDTHSINVVPFPSTLSLSTGNSQIVVCPPGVTQAYFPSHVAAMDMDPRQINHYQMLSSSSQNPSFSLAMMTPKLFHSPNNSESPSHKDQDFPSK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00024 329 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Gabi2596g00024 329 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 291 IPR005333 GO:0003700
Gabi2596g00024 329 MobiDBLite consensus disorder prediction 1 33 - -
Gabi2596g00024 329 MobiDBLite consensus disorder prediction 308 329 - -
Gabi2596g00024 329 Pfam TCP family transcription factor 49 162 IPR017887 -
Gabi2596g00024 329 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00024 Gabi-Chr2596 206388 208606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00024 32 290 TCP Transcription Factor Family AT3G02150 41.455 5.79e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2596g00024 TCP 1.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00024 - - gmx:100816424 483.411