Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00019 ATGCAGCTTCTGGCAAACCAAAAGAAACCAAGAACAAAGAAAAAGAAAAATCTACTCTTCATTTTCTTCAACAAACACTCTTACCCAAATATGGTGAACTTCAGAAAGAACAAAGCTCCCTTTGAGATCAACCTCTCTCTGCTTTTTTTTCTCCTTCAACTTCAACTTTTGTTCATTCTGCAGGCTTACTCATACAATTACAACCCTGCTGATAATTTTGCTGTTAACTGTGGCAACTCCCGAAATATTAGCTTTCAAAATCGAAAATGGGTTGGAGACGACGTTGACACCAAACCATTTTCAATCATTGAATCACAAACTAGTCAATCATTGAATGCACCTAACCCTCCTACCTCAGTTCCATTTGGTTCCGCACGAATCTCTCACTCCAAATTCACATACTCTTTCCCAGTCACCAACGGTCCAAAGTTCATTCGGCTTCACTTTTATCCAACTTCATATCTCAACTTTGAACCCAACAACTCCCTCTTCTCTGTCATAGTAGGAAGCGACCTTACCCTTCTCAAAGACTTCAAACCCTTACTTTGGGTTCACAACAATCCTGATGATAACAAAATCACCAAAGAGTACTGTATCAACGTGGAAAAAGGTGAGAGCTTAAACATAACCTTCATTCCCAGCACCAATCACTCCAACGCTTACGCTTTCATCAACGGAATTGAGGTCGTGTCTATGCCCACCCACCTCTATTACAGTGATCCAAACGTAGATGATCCTAATTTGGAGGTTAAACTCGTGGGTCCTGATAACTACACTCCACACCCAATTCAAAATTCCAAAGCGTTGGAGACACTTTACAGAGTCAACGTTGGCGATCCCCAGGTTCCACCAAGTAATGATACTGGTATGTTTCGGAATTGGGACAACGATTATCCTCTCTACTTGGAGAAGCAATATGGCCAAACTGTATCAAGTGGCTATGGAATTACTCCAATCTACAAAGATAATGTTACTCCAAATTACACAGCACCAAGCGAAGTATACCTCACTGCAAGAAGTTACGGGAAGGGTGCGACTGAGAATTATAATGTGACATGGAATTTTGAAGTGGACTCAGAGTTTACTTATATGGTGAGGTTACATTTCTGCGAGTTTGACAAATTGATTCAAAGTTACGGTGATAGAACTTTCCAGATTTTTATAGATGACACTTTGGCTGAGGAAAAAGCCGATGTTATTGGCTGGAGTGGAGGTTACCTTGTTCCTGTTCGTAAGGATTATGCTGTGCTTATGTCCAAACATGGAAGCACTGAGAAAGTTAACCTTTCGATCAAACTTCAACGGTTGCCAGAGGGAGAAGGTAACACCAAATATGTTGATGTCATATTGAATGGCATCGAGGTTTTCAAGATAAGTGACGAAAATAACAACCTCGCTGGAACAAATCCTGAACCAACAACTCTGTCTCCTCCTCCGGGACAAGTGGTTCAAACAGAGTCATCAAAGAAATCGAAGAAGACCATTGTAGTTATCATTGCCGCGGTTGCAATTTCGAGCCTCGTGATTGTGTTTGTTGTTATTGGGTTTTTAGTTTTACGGGGAAGGAAAAGAGGTGGTGACGTGGATGAAAATGAAAACTCATCATGGAAGAGAAAGAATGAAGGTTCGTCTTTACCATCCCATTTGTGTCGTTACTTTACAATCGCTGAGATAAGAGCTTCCACAAACAACTTCGATGATGTTTTCCTCATCGGCGTTGGAGGTTTCGGCAACGTGTACAAAGGTTACATCGATGGTTCCACACCCGTTGCGATCAAACGCCTTAAACAGGGTTCTCAACAGGGTTTCAATGAGTTCATGAACGAGATTGAGATGCTTTCTCAGCTTCGTCACCTTCATTTGGTTTCCCTCATTGGTTATTGCAACGATGGCGCAGAGATGATCCTTGTTTATGACTTCATGCAACGTGGCACTCTCCGCGAGTATCTCTACGACTCAGATAACGATCCCCTTCCGTGGAAACAGAGGCTCGAGATTCTATTGGGTGCGGCAAGAGGGTTGCATTATCTTCATGCGGGTGCGAAGCACAATATCATTCACCGTGACGTGAAAACCACCAACATCTTGTTGGATGAGAAATGGGTGGCTAAGGTTTCTGATTTCGGGTTATCCAAAGTGGGACCCACGGGGATGTCGAATACACACGTCAGCACGATCGTGAAGGGTAGTCTTGGGTATTTTGATCCTGAATACTGCAAGCGTCAAAGGTTGACTCTTAAGTCTGACGTGTACTCATTCGGTGTGGTGCTTCTCGAGGTGTTGTGTGCGAGGCCACCTTTGATTCGTAGGTTGGAGAAACAGAAGGCGAGTTTGGTTGATTGGGTTCGGAGATGTTATGATAAAGGAGAGATTGATCAGACGGTGGACCCGTTTCTGAAGGATTCAATCACGGATGAGTGTTTGAAATGTTATAGCCAGATGGCGTTGAGTTGTTTGCTAGATGATGGGAATCAACGGCCCTCGATGAGTGATGTGGTTGGGGCACTTGAGTTTGCAATGCAGTTGGTGGAGACTGATCAGGAAGATAACGAGTTTAGTGGGACCCAAGAAGTGGGAAAAAGTGAGCAAGGACCGTTGTTAACGAAGTTTTTGAGTGATGAAGGGAGTGATGTGCGTTTCACCAGTAGTGATGAATCGGTGTCAAAGTCAAGCAATGCGACAGCTGTCTCGGCCAGTACTGAGGAACAAGCTTTGGTTTCTGCTACGGTGTTCTCCGAGATTGCAAATCCAAGAGCACGATAG 2763 0.435 MQLLANQKKPRTKKKKNLLFIFFNKHSYPNMVNFRKNKAPFEINLSLLFFLLQLQLLFILQAYSYNYNPADNFAVNCGNSRNISFQNRKWVGDDVDTKPFSIIESQTSQSLNAPNPPTSVPFGSARISHSKFTYSFPVTNGPKFIRLHFYPTSYLNFEPNNSLFSVIVGSDLTLLKDFKPLLWVHNNPDDNKITKEYCINVEKGESLNITFIPSTNHSNAYAFINGIEVVSMPTHLYYSDPNVDDPNLEVKLVGPDNYTPHPIQNSKALETLYRVNVGDPQVPPSNDTGMFRNWDNDYPLYLEKQYGQTVSSGYGITPIYKDNVTPNYTAPSEVYLTARSYGKGATENYNVTWNFEVDSEFTYMVRLHFCEFDKLIQSYGDRTFQIFIDDTLAEEKADVIGWSGGYLVPVRKDYAVLMSKHGSTEKVNLSIKLQRLPEGEGNTKYVDVILNGIEVFKISDENNNLAGTNPEPTTLSPPPGQVVQTESSKKSKKTIVVIIAAVAISSLVIVFVVIGFLVLRGRKRGGDVDENENSSWKRKNEGSSLPSHLCRYFTIAEIRASTNNFDDVFLIGVGGFGNVYKGYIDGSTPVAIKRLKQGSQQGFNEFMNEIEMLSQLRHLHLVSLIGYCNDGAEMILVYDFMQRGTLREYLYDSDNDPLPWKQRLEILLGAARGLHYLHAGAKHNIIHRDVKTTNILLDEKWVAKVSDFGLSKVGPTGMSNTHVSTIVKGSLGYFDPEYCKRQRLTLKSDVYSFGVVLLEVLCARPPLIRRLEKQKASLVDWVRRCYDKGEIDQTVDPFLKDSITDECLKCYSQMALSCLLDDGNQRPSMSDVVGALEFAMQLVETDQEDNEFSGTQEVGKSEQGPLLTKFLSDEGSDVRFTSSDESVSKSSNATAVSASTEEQALVSATVFSEIANPRAR 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00019 920 MobiDBLite consensus disorder prediction 877 900 - -
Gabi2596g00019 920 Pfam Malectin-like domain 75 458 IPR024788 -
Gabi2596g00019 920 Gene3D Phosphorylase Kinase; domain 1 527 640 - -
Gabi2596g00019 920 ProSitePatterns Protein kinases ATP-binding region signature. 571 593 IPR017441 GO:0005524
Gabi2596g00019 920 FunFam FERONIA receptor-like kinase 72 233 - -
Gabi2596g00019 920 CDD STKc_IRAK 571 837 - -
Gabi2596g00019 920 Gene3D Transferase(Phosphotransferase) domain 1 641 860 - -
Gabi2596g00019 920 ProSiteProfiles Protein kinase domain profile. 565 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2596g00019 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 685 697 IPR008271 GO:0004672|GO:0006468
Gabi2596g00019 920 SUPERFAMILY Protein kinase-like (PK-like) 542 840 IPR011009 -
Gabi2596g00019 920 FunFam receptor-like protein kinase FERONIA 528 640 - -
Gabi2596g00019 920 FunFam FERONIA receptor-like kinase 267 459 - -
Gabi2596g00019 920 Gene3D - 267 459 - -
Gabi2596g00019 920 Gene3D - 72 233 - -
Gabi2596g00019 920 MobiDBLite consensus disorder prediction 466 486 - -
Gabi2596g00019 920 SMART serkin_6 565 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2596g00019 920 PANTHER OS03G0124300 PROTEIN-RELATED 46 540 IPR046957 GO:0004672
Gabi2596g00019 920 FunFam Receptor-like protein kinase FERONIA 641 858 - -
Gabi2596g00019 920 MobiDBLite consensus disorder prediction 524 544 - -
Gabi2596g00019 920 Pfam Protein tyrosine and serine/threonine kinase 571 834 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00019 Gabi-Chr2596 151346 154990 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00019 66 920 Receptor kinase-like Gene Family AT3G51550 45.973 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi2596g00019 Malectin_like 1.7e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00019 - - mtr:25497555 936.406