Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00017 ATGGTGCACTTGAGCTTGAAAAACTTCGGCCGTGTTGCTAAATCATCAAGGTTCAGTTTCTCTTATCTGATATTCTCATTCCTTAGGCACATGTTCATAATCCCCGTTAACTCTTACACCCTTGTATTAGTCCCCGAAGCAAAAACCAACCATGGTTCATTAGATTCCTCAAAGAGTGACAAAACAATATTTGATGTTGTTTTCTTCGGTGCACTGGTTTCTGCTTTCATTTTGGTCCCTGTTGTTTTCTTCTTGTGTAATTGGTTCTGGCAAATAGGTAATAGAACCAAGCGCAAGACAGAGGTGGAGATGCTCTCTGAAGAGATAAGCAATAAAAGTAGATCAATGAAGCCTTCAGATACGTGCCGTTACTTTTCAATCAATGAGATAAGAGCAGCCACTATAAACTTCGATGATATTTTCGTTGTTGGAGTTGGTGGTTTTGGAAAAGTGTACACAGGATACATTGATGATGGAACCACACCTGTGGCAATCAAACGCTTCATACCAAATCGTGGACAAGGAGTTCAAGAGTTCATAACAGAGGTTGAGATGTTGTCTCAGCTTAAACACCCTCATTTGGTTTCTCTAATAGGTTTTTGTAACGATGAAGATGATATGATTATTGTTTACGATTTCATGGCTAATGGAACCTTACGTGACCATCTATATGGCTCTTCAAACACACCTTATCTTTCTTGGAAGCAAAGGCTTGAGATTTGCATTGGGGCAGGGCTTGGATTGCAGTATCTCCATAATGGTGCCAAGTACAGCATAATCCATCGAGATGTGAAGACTTCAAACATTTTGTTGGATGAGAAATGGGTGGCTAAGATTTCAGATTTCGGGTTGTCCAAAATTGGACCCAATGGGATATCAAAGTTCCATGTTACCACACAGGTTAAGGGTAGCCTTGGATATTTGGACCCTGAATATTCAAAGACTAAAAGGTTGACTCACAAGTCTGATGTGTACTCTTTTGGTGTGGTGTTGCTTGAGGTATTGTGTGGTAGGCCACCTTTGATGCGTAAAGTGGAGGGAATACAGAGAAGTCTTGTGGAGTGGGCCCGAGCATGCCACAGTGAGGGACCACAAGCCTTGGACCAAATGATTGATCCATTTATTAGAGGAAAGAGTGTGCCAGATTGTTTGTATAAGTTCGTTGAGATGGCACTCAATTGTGTTGTTCATGATGGAAATCAACGGCCATCGATGAGCGATGTGGTAGAGGGACTTCAGCATGTTTTGCAGCTACAATACAAGAGTGCATGGAAGAAGATCCAAGGCTCGAAGGGACCCATTAATGACCAAAGATTTCTATATAGCTTGAGAAGAAAAATGATATTGAATTGCAGGTGTTGA 1362 0.4126 MVHLSLKNFGRVAKSSRFSFSYLIFSFLRHMFIIPVNSYTLVLVPEAKTNHGSLDSSKSDKTIFDVVFFGALVSAFILVPVVFFLCNWFWQIGNRTKRKTEVEMLSEEISNKSRSMKPSDTCRYFSINEIRAATINFDDIFVVGVGGFGKVYTGYIDDGTTPVAIKRFIPNRGQGVQEFITEVEMLSQLKHPHLVSLIGFCNDEDDMIIVYDFMANGTLRDHLYGSSNTPYLSWKQRLEICIGAGLGLQYLHNGAKYSIIHRDVKTSNILLDEKWVAKISDFGLSKIGPNGISKFHVTTQVKGSLGYLDPEYSKTKRLTHKSDVYSFGVVLLEVLCGRPPLMRKVEGIQRSLVEWARACHSEGPQALDQMIDPFIRGKSVPDCLYKFVEMALNCVVHDGNQRPSMSDVVEGLQHVLQLQYKSAWKKIQGSKGPINDQRFLYSLRRKMILNCRC 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00017 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Gabi2596g00017 453 PANTHER OS07G0166700 PROTEIN 121 419 IPR045272 GO:0004714|GO:0006468
Gabi2596g00017 453 Gene3D Transferase(Phosphotransferase) domain 1 214 433 - -
Gabi2596g00017 453 FunFam Receptor-like protein kinase FERONIA 214 432 - -
Gabi2596g00017 453 CDD STKc_IRAK 152 413 - -
Gabi2596g00017 453 FunFam receptor-like protein kinase FERONIA 97 213 - -
Gabi2596g00017 453 SMART serkin_6 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2596g00017 453 Pfam Protein tyrosine and serine/threonine kinase 143 411 IPR001245 GO:0004672|GO:0006468
Gabi2596g00017 453 SUPERFAMILY Protein kinase-like (PK-like) 119 414 IPR011009 -
Gabi2596g00017 453 Gene3D Phosphorylase Kinase; domain 1 121 213 - -
Gabi2596g00017 453 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Gabi2596g00017 453 ProSiteProfiles Protein kinase domain profile. 137 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00017 Gabi-Chr2596 116558 119230 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00017 118 441 Receptor kinase-like Gene Family AT3G51550 59.568 2.49e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi2596g00017 PK_Tyr_Ser-Thr 6.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00017 - - adu:107486605 526.554