Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00010 ATGCTTCTCAAATGTTTGGGTTTCTGCCACTCAAAGGATACAAGTGCATCTAAGGGACAGTATCCAACAGTGATAGAAGAGCTATGCCATCATTTTTCCCCGGCTGATCTTAGGAAATCAACCAACAACTTTGATGAAAACCAACTAATTGGACGTGGAGGCTTTGGTAGTGTATATAAAGGATTCTGCAACCTCAAACATGAGAAGATTATTGTGTACGACTACATACCCAATGGAACTTTCCATGATCATCTACACGATAGGGACAGGGACACACTCTCATGGAAGAAAAGGCTTGAGATATGCATAGGAGCAGCATGTGGGGTGCACTACCTTCACACAGGAGCCAAGCGCACGATAATTCACCTTGACGTAAAGCCTAGTAACATTCTTTTGGATAGCAATATGGTTCCCAAACTCACAGATTTCGGGCTTTCCTTACAGGGACAACGTTTCATGTCGAAGCCAAAACCAATTGAAGTAGACCGCATTTGTGGTACTTTCGGTTTCATGGCCCCTGAGTATACCATGTACGGTACCGTCACAGATAAATGTGATGTTTACTCATTTGGTAGGCTTCTACTAGAAGTTGTGTTGGAAAAGCCAATATCCTCAATACAGTCGTCCAAACCTGCTTGGGAGAATATTGATCCGAATCTCAAAGGGAATATTGCACCAGAGTGTTGGGAAGTATTTATGGATATCACGGAAAGATGCTTGAAGGAGGAAGCAGATGAGCGACCAACAATGGGTGAAGTAGAGGTGCAACTTGAGCTTGCTCTATCATTGCAGGAAGAAGCAGATAGCACAACTACCAATGGTAAATACACCTTATTGTCCAACACCATTATTAAGCTGGGACCGGAATTTGAGGACAGTGTGATATAG 888 0.4302 MLLKCLGFCHSKDTSASKGQYPTVIEELCHHFSPADLRKSTNNFDENQLIGRGGFGSVYKGFCNLKHEKIIVYDYIPNGTFHDHLHDRDRDTLSWKKRLEICIGAACGVHYLHTGAKRTIIHLDVKPSNILLDSNMVPKLTDFGLSLQGQRFMSKPKPIEVDRICGTFGFMAPEYTMYGTVTDKCDVYSFGRLLLEVVLEKPISSIQSSKPAWENIDPNLKGNIAPECWEVFMDITERCLKEEADERPTMGEVEVQLELALSLQEEADSTTTNGKYTLLSNTIIKLGPEFEDSVI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00010 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Gabi2596g00010 295 Gene3D Transferase(Phosphotransferase) domain 1 76 282 - -
Gabi2596g00010 295 SUPERFAMILY Protein kinase-like (PK-like) 19 257 IPR011009 -
Gabi2596g00010 295 FunFam Receptor-like protein kinase ANXUR2 76 279 - -
Gabi2596g00010 295 PANTHER OS07G0166700 PROTEIN 28 61 IPR045272 GO:0004714|GO:0006468
Gabi2596g00010 295 Gene3D Phosphorylase Kinase; domain 1 13 73 - -
Gabi2596g00010 295 Pfam Protein tyrosine and serine/threonine kinase 60 256 IPR001245 GO:0004672|GO:0006468
Gabi2596g00010 295 SMART serkin_6 44 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2596g00010 295 ProSiteProfiles Protein kinase domain profile. 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00010 Gabi-Chr2596 80424 86561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00010 3 275 Receptor kinase-like Gene Family AT3G51550 37.278 5.39e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi2596g00010 PK_Tyr_Ser-Thr 6.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00010 - - gmx:100305395 323.553