Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00009 ATGCTTCCCAAGTATATGTGCTTCTGTTGGTCAAAGCATACAAGGTCATCATCATCATCATCTAAAAAGCAGTCTCCGACAATAATAGAAGAGCTATGCTGTAAATTTTCCCTCGAGGATCTAAGAAAATCAACCAACAACTTTGATGAAAAACGAATAATAGGAAGAGGAGGCTTTGGTGACGTGTACAAGGGTCATCTTAAACATGATGAGGGAACTGATTATGCAATTGCATTGAAGCGTATGTATAGAAAATCACGGCAAGGGATCATGGAGTTCAAGAATGAAATAGAGTTGCTCTGCCAGCTTTGTCACCCTAATTTGGTCTCTCTTGTAGGATTCTATGACGACAAAAACGAGACAATTATTGTGTATGACTACATGGCAAATGGATCTCTCCATGATCGTCTATATTGCAAGGATATGGAACCACTTTCATGGAAGAAAAGGCTAGAGATATGCATAGCAGTAGCGCATGGACTGCACTATCTTCACACTGGAGCCAAACGCACCATCTTTCACCAAAACCTCAATCTCAATAGCATTCTTTTGGATAACAATATGGTGCCAAAAATCACTGGTTTCGGGCTTTCCTTACAGGGACCACGTTTTATTGCTGGTACATCTGGTTACAATGCCCCAAACAATACATTCACAGTTGAATATGACGTGTACTCTTTTGGTGTAGTTATGCTACTAGTGATATGCACAAAGGACAAGCAAACAATTTTTGACAAGATAAACAGAGTAGAGAACCAAAGCAAAGAATTAGAGAAGTTTATTAAGGTTACCCCAGCAACCATGGATATATATGACTTGGTGCACAGGTTCCCGGTTGAGGAGATGATGGATCCAATTCTCAAAGGAAAGATTGCACCTGGGTGTTGGGAAGTATTTATAGATATTGCAGAAAGATGCTTGAAGCAGGAACCAAATGAGAGACCAACAATGGGTGAAGTAGAGGTGCAACTTGAGTATGGTCTGGCACTGCAAGAGGAAGCAGATGCCACCAAGACTAGTGGTGATTTTATCTTATTATCCACAACCATTTTTAATACTGAGCCCGAGTAG 1071 0.4043 MLPKYMCFCWSKHTRSSSSSSKKQSPTIIEELCCKFSLEDLRKSTNNFDEKRIIGRGGFGDVYKGHLKHDEGTDYAIALKRMYRKSRQGIMEFKNEIELLCQLCHPNLVSLVGFYDDKNETIIVYDYMANGSLHDRLYCKDMEPLSWKKRLEICIAVAHGLHYLHTGAKRTIFHQNLNLNSILLDNNMVPKITGFGLSLQGPRFIAGTSGYNAPNNTFTVEYDVYSFGVVMLLVICTKDKQTIFDKINRVENQSKELEKFIKVTPATMDIYDLVHRFPVEEMMDPILKGKIAPGCWEVFIDIAERCLKQEPNERPTMGEVEVQLEYGLALQEEADATKTSGDFILLSTTIFNTEPE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00009 356 PANTHER OS07G0166700 PROTEIN 33 331 IPR045272 GO:0004714|GO:0006468
Gabi2596g00009 356 FunFam Receptor-like protein kinase ANXUR2 13 127 - -
Gabi2596g00009 356 Gene3D Phosphorylase Kinase; domain 1 9 127 - -
Gabi2596g00009 356 Gene3D Transferase(Phosphotransferase) domain 1 128 344 - -
Gabi2596g00009 356 ProSitePatterns Protein kinases ATP-binding region signature. 54 80 IPR017441 GO:0005524
Gabi2596g00009 356 SUPERFAMILY Protein kinase-like (PK-like) 23 325 IPR011009 -
Gabi2596g00009 356 Pfam Protein tyrosine and serine/threonine kinase 51 323 IPR001245 GO:0004672|GO:0006468
Gabi2596g00009 356 ProSiteProfiles Protein kinase domain profile. 48 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00009 Gabi-Chr2596 77368 78718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00009 9 334 Receptor kinase-like Gene Family AT5G38990 38.889 3.81e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi2596g00009 PK_Tyr_Ser-Thr 1.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00009 - - adu:107486597 387.497